Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL590808.1-201ENST00000618696 141 ntBASIC2.38□□□□□ -2.03
LDB2O43679 AC090517.3-201ENST00000625170 141 ntBASIC2.38□□□□□ -2.03
LDB2O43679 CTSLP2-204ENST00000629029 392 ntBASIC2.38□□□□□ -2.03
LDB2O43679 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
LDB2O43679 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.38□□□□□ -2.03
LDB2O43679 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LDB2O43679 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.37□□□□□ -2.03
LDB2O43679 Y_RNA.47-201ENST00000362697 108 ntBASIC2.37□□□□□ -2.03
LDB2O43679 Y_RNA.458-201ENST00000384240 102 ntBASIC2.37□□□□□ -2.03
LDB2O43679 RNU6-611P-201ENST00000384276 104 ntBASIC2.37□□□□□ -2.03
LDB2O43679 SNORA67.4-201ENST00000384688 142 ntBASIC2.37□□□□□ -2.03
LDB2O43679 MIR329-1-201ENST00000385028 80 ntBASIC2.37□□□□□ -2.03
LDB2O43679 MIR549A-201ENST00000385268 96 ntBASIC2.37□□□□□ -2.03
LDB2O43679 RPL21P1-201ENST00000399532 476 ntBASIC2.37□□□□□ -2.03
LDB2O43679 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LDB2O43679 SNORD12B-201ENST00000410433 91 ntBASIC2.37□□□□□ -2.03
LDB2O43679 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
LDB2O43679 AL445687.1-201ENST00000439946 251 ntBASIC2.37□□□□□ -2.03
LDB2O43679 SNORA25.14-201ENST00000516481 132 ntBASIC2.37□□□□□ -2.03
LDB2O43679 MIR3945-201ENST00000581853 98 ntBASIC2.37□□□□□ -2.03
LDB2O43679 MIR3117-201ENST00000584034 78 ntBASIC2.37□□□□□ -2.03
LDB2O43679 AL713866.2-201ENST00000603579 219 ntBASIC2.37□□□□□ -2.03
LDB2O43679 AC046143.2-201ENST00000609789 160 ntBASIC2.37□□□□□ -2.03
LDB2O43679 AC010999.1-201ENST00000611856 324 ntBASIC2.37□□□□□ -2.03
LDB2O43679 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
LDB2O43679 7SK.10-201ENST00000621414 298 ntBASIC2.37□□□□□ -2.03
LDB2O43679 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
LDB2O43679 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.36□□□□□ -2.03
LDB2O43679 Y_RNA.183-201ENST00000363882 113 ntBASIC2.36□□□□□ -2.03
LDB2O43679 SNORD114-30-201ENST00000364448 72 ntBASIC2.36□□□□□ -2.03
LDB2O43679 SNORD32B-201ENST00000364460 84 ntBASIC2.36□□□□□ -2.03
LDB2O43679 RNU6-1145P-201ENST00000384246 107 ntBASIC2.36□□□□□ -2.03
LDB2O43679 RNU6-196P-201ENST00000384315 107 ntBASIC2.36□□□□□ -2.03
LDB2O43679 MIR568-201ENST00000385036 95 ntBASIC2.36□□□□□ -2.03
LDB2O43679 MRPL35P1-201ENST00000404272 572 ntBASIC2.36□□□□□ -2.03
LDB2O43679 MIR1302-3-201ENST00000408128 138 ntBASIC2.36□□□□□ -2.03
LDB2O43679 RNU6-130P-201ENST00000411112 103 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.36□□□□□ -2.03
LDB2O43679 AC007395.1-201ENST00000451333 677 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.36□□□□□ -2.03
LDB2O43679 AC234781.5-201ENST00000508429 271 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AC023141.11-201ENST00000508864 202 ntBASIC2.36□□□□□ -2.03
LDB2O43679 RNU6-397P-201ENST00000516226 104 ntBASIC2.36□□□□□ -2.03
LDB2O43679 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
LDB2O43679 SNORA40.15-201ENST00000516884 107 ntBASIC2.36□□□□□ -2.03
LDB2O43679 RNU6-897P-201ENST00000517135 105 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.36□□□□□ -2.03
LDB2O43679 MIR4659A-201ENST00000580269 81 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.36□□□□□ -2.03
LDB2O43679 AP000942.4-201ENST00000604811 241 ntBASIC2.36□□□□□ -2.03
LDB2O43679 Y_RNA.772-201ENST00000606692 102 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AC240442.1-201ENST00000616055 283 ntBASIC2.36□□□□□ -2.03
LDB2O43679 AC005562.2-201ENST00000618264 111 ntBASIC2.36□□□□□ -2.03
LDB2O43679 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.36□□□□□ -2.03
LDB2O43679 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
LDB2O43679 RNA5SP289-201ENST00000362332 137 ntBASIC2.35□□□□□ -2.03
LDB2O43679 RNU1-62P-201ENST00000362599 164 ntBASIC2.35□□□□□ -2.03
LDB2O43679 RNU6-238P-201ENST00000363313 106 ntBASIC2.35□□□□□ -2.03
LDB2O43679 Y_RNA.179-201ENST00000363844 90 ntBASIC2.35□□□□□ -2.03
LDB2O43679 Y_RNA.214-201ENST00000364201 112 ntBASIC2.35□□□□□ -2.03
LDB2O43679 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
LDB2O43679 Y_RNA.439-201ENST00000384119 94 ntBASIC2.35□□□□□ -2.03
LDB2O43679 SNORA12-201ENST00000391162 147 ntBASIC2.35□□□□□ -2.03
LDB2O43679 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB2O43679 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB2O43679 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.35□□□□□ -2.03
LDB2O43679 AL731563.1-201ENST00000442202 214 ntBASIC2.35□□□□□ -2.03
LDB2O43679 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
LDB2O43679 RNU6-1143P-201ENST00000516125 104 ntBASIC2.35□□□□□ -2.03
LDB2O43679 Y_RNA.683-201ENST00000516508 93 ntBASIC2.35□□□□□ -2.03
LDB2O43679 RNU6-586P-201ENST00000517265 104 ntBASIC2.35□□□□□ -2.03
LDB2O43679 HSPE1P18-201ENST00000517602 280 ntBASIC2.35□□□□□ -2.03
LDB2O43679 AC021269.2-201ENST00000532318 330 ntBASIC2.35□□□□□ -2.03
LDB2O43679 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB2O43679 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.35□□□□□ -2.03
LDB2O43679 RPL17P51-201ENST00000605218 238 ntBASIC2.35□□□□□ -2.03
LDB2O43679 TCL6_2.1-201ENST00000615162 119 ntBASIC2.35□□□□□ -2.03
LDB2O43679 AC130454.1-201ENST00000622948 401 ntBASIC2.35□□□□□ -2.03
LDB2O43679 AC064859.1-201ENST00000624741 174 ntBASIC2.35□□□□□ -2.03
LDB2O43679 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LDB2O43679 RNU6-793P-201ENST00000384233 104 ntBASIC2.34□□□□□ -2.03
LDB2O43679 RNU6-1274P-201ENST00000384557 107 ntBASIC2.34□□□□□ -2.03
LDB2O43679 Y_RNA.595-201ENST00000410403 105 ntBASIC2.34□□□□□ -2.03
LDB2O43679 Y_RNA.597-201ENST00000410463 100 ntBASIC2.34□□□□□ -2.03
LDB2O43679 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.34□□□□□ -2.03
LDB2O43679 ELOCP20-201ENST00000422460 345 ntBASIC2.34□□□□□ -2.03
LDB2O43679 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.34□□□□□ -2.03
LDB2O43679 AC027124.2-201ENST00000428249 105 ntBASIC2.34□□□□□ -2.03
LDB2O43679 AC018634.1-201ENST00000437554 401 ntBASIC2.34□□□□□ -2.03
LDB2O43679 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.34□□□□□ -2.03
LDB2O43679 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.34□□□□□ -2.03
LDB2O43679 RNA5SP24-201ENST00000516478 95 ntBASIC2.34□□□□□ -2.03
LDB2O43679 CYCSP23-201ENST00000519781 313 ntBASIC2.34□□□□□ -2.03
LDB2O43679 DEFB131C-201ENST00000528817 165 ntBASIC2.34□□□□□ -2.03
LDB2O43679 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
LDB2O43679 MIR3616-201ENST00000584070 92 ntBASIC2.34□□□□□ -2.03
LDB2O43679 AL137847.3-201ENST00000611521 109 ntBASIC2.34□□□□□ -2.03
LDB2O43679 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.34□□□□□ -2.03
LDB2O43679 AC011476.5-201ENST00000615594 130 ntBASIC2.34□□□□□ -2.03
LDB2O43679 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms