Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AP000907.4-201ENST00000604143 237 ntBASIC0.02□□□□□ -2.41
HMGB3O15347 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.02□□□□□ -2.41
HMGB3O15347 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
HMGB3O15347 MIR103A2-201ENST00000362154 78 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 MIR103A1-201ENST00000362165 78 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 RNU4-68P-201ENST00000364314 141 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 SNORD105-201ENST00000386910 85 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 RNA5SP219-201ENST00000390940 113 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 CALM2P3-201ENST00000400429 449 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 MIR1276-201ENST00000408707 83 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.01□□□□□ -2.41
HMGB3O15347 AC007215.1-201ENST00000464893 276 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.01□□□□□ -2.41
HMGB3O15347 SCARNA24.1-201ENST00000516465 137 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 AL137100.2-201ENST00000555786 315 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC0.01□□□□□ -2.41
HMGB3O15347 MIR151B-201ENST00000584249 96 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.01□□□□□ -2.41
HMGB3O15347 AC022418.1-201ENST00000624118 445 ntBASIC0.01□□□□□ -2.41
HMGB3O15347 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0□□□□□ -2.41
HMGB3O15347 SNORD44.1-201ENST00000363202 61 ntBASIC0□□□□□ -2.41
HMGB3O15347 MIR32-201ENST00000384965 70 ntBASIC0□□□□□ -2.41
HMGB3O15347 RNA5SP193-201ENST00000410353 107 ntBASIC0□□□□□ -2.41
HMGB3O15347 AL663109.1-201ENST00000411498 844 ntBASIC0□□□□□ -2.41
HMGB3O15347 AC067940.1-201ENST00000458411 300 ntBASIC0□□□□□ -2.41
HMGB3O15347 AC079140.5-201ENST00000507882 310 ntBASIC0□□□□□ -2.41
HMGB3O15347 AC010493.1-201ENST00000513479 292 ntBASIC0□□□□□ -2.41
HMGB3O15347 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0□□□□□ -2.41
HMGB3O15347 RNU6-1220P-201ENST00000517126 108 ntBASIC0□□□□□ -2.41
HMGB3O15347 MIR4768-201ENST00000585270 74 ntBASIC0□□□□□ -2.41
HMGB3O15347 AL139418.1-201ENST00000613613 177 ntBASIC0□□□□□ -2.41
HMGB3O15347 AL078596.1-201ENST00000624856 447 ntBASIC0□□□□□ -2.41
HMGB3O15347 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNU4-45P-201ENST00000365469 141 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNU6-157P-201ENST00000383957 107 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 MIR936-201ENST00000401264 98 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNA5SP247-201ENST00000411181 105 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-0.01□□□□□ -2.41
HMGB3O15347 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-0.01□□□□□ -2.41
HMGB3O15347 USP9YP29-201ENST00000445112 563 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RPS20P10-201ENST00000451209 253 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 MTCO2P18-201ENST00000457151 658 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AP000870.1-201ENST00000472927 406 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNU6-405P-201ENST00000516637 110 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 RNU6-467P-201ENST00000517027 110 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AC036111.3-201ENST00000526389 112 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.01□□□□□ -2.41
HMGB3O15347 AL117336.2-201ENST00000602435 335 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AC025449.1-201ENST00000603896 529 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AC138749.5-201ENST00000611461 208 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AC122133.1-201ENST00000613964 233 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AC009159.2-201ENST00000617603 606 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 AC068792.1-201ENST00000621354 417 ntBASIC-0.01□□□□□ -2.41
HMGB3O15347 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.01□□□□□ -2.41
HMGB3O15347 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
HMGB3O15347 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.02□□□□□ -2.41
HMGB3O15347 RNU6-660P-201ENST00000364566 109 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.02□□□□□ -2.41
HMGB3O15347 SNORD111-201ENST00000408139 94 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 MIR1827-201ENST00000408549 66 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 MIR1185-1-201ENST00000408598 86 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 RNU2-70P-201ENST00000410718 179 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.02□□□□□ -2.41
HMGB3O15347 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-0.02□□□□□ -2.41
HMGB3O15347 RNU7-12P-201ENST00000516030 62 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 RNU6-323P-201ENST00000521915 107 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 MIR4667-201ENST00000578933 66 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 AC068790.2-201ENST00000602601 557 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 RNU6-94P-201ENST00000607728 107 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 AC008133.2-201ENST00000624540 351 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 U6.114-201ENST00000636407 96 ntBASIC-0.02□□□□□ -2.41
HMGB3O15347 Y_RNA.191-201ENST00000363972 113 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 RNY1P12-201ENST00000364251 105 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 RNU6-169P-201ENST00000365336 107 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 RNU6-393P-201ENST00000384475 107 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGB3O15347 RPL31P35-201ENST00000431058 377 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.03□□□□□ -2.41
HMGB3O15347 RNU7-28P-201ENST00000516759 62 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 AF235103.2-201ENST00000525753 346 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC-0.03□□□□□ -2.41
HMGB3O15347 AC104984.5-201ENST00000586878 94 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 7SK.7-201ENST00000603504 247 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 AC002044.1-201ENST00000606707 158 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 AL031667.3-201ENST00000620124 655 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.03□□□□□ -2.41
HMGB3O15347 MIR924-201ENST00000638017 53 ntBASIC-0.03□□□□□ -2.41
HMGB3O15347 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.04□□□□□ -2.42
HMGB3O15347 Y_RNA.18-201ENST00000362461 102 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 RNU1-133P-201ENST00000364867 167 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.04□□□□□ -2.42
HMGB3O15347 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC-0.04□□□□□ -2.42
HMGB3O15347 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.04□□□□□ -2.42
HMGB3O15347 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms