Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 MIR203B-201ENST00000636080 86 ntBASIC1.78□□□□□ -2.12
CDX4O14627 SNORD98-201ENST00000636377 67 ntBASIC1.78□□□□□ -2.12
CDX4O14627 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.78□□□□□ -2.12
CDX4O14627 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
CDX4O14627 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.78□□□□□ -2.13
CDX4O14627 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDX4O14627 AC009541.1-201ENST00000438279 2662 ntBASIC1.77□□□□□ -2.13
CDX4O14627 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.77□□□□□ -2.13
CDX4O14627 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CDX4O14627 Y_RNA.5-201ENST00000362334 102 ntBASIC1.77□□□□□ -2.13
CDX4O14627 snoU2_19.1-201ENST00000362361 80 ntBASIC1.77□□□□□ -2.13
CDX4O14627 Y_RNA.395-201ENST00000383945 109 ntBASIC1.77□□□□□ -2.13
CDX4O14627 RNU6-546P-201ENST00000383991 107 ntBASIC1.77□□□□□ -2.13
CDX4O14627 SNORA6-201ENST00000384033 151 ntBASIC1.77□□□□□ -2.13
CDX4O14627 RNU6-1032P-201ENST00000384100 107 ntBASIC1.77□□□□□ -2.13
CDX4O14627 Y_RNA.463-201ENST00000384271 102 ntBASIC1.77□□□□□ -2.13
CDX4O14627 RNU6-1274P-201ENST00000384557 107 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AL591034.2-201ENST00000402839 359 ntBASIC1.77□□□□□ -2.13
CDX4O14627 HMGB3P2-201ENST00000411913 584 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AL590135.1-201ENST00000422215 156 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AC019205.3-201ENST00000424573 156 ntBASIC1.77□□□□□ -2.13
CDX4O14627 CBX3P6-201ENST00000430257 527 ntBASIC1.77□□□□□ -2.13
CDX4O14627 IPO7P1-201ENST00000442031 636 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AL137792.2-201ENST00000443484 235 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AC016700.2-201ENST00000446011 156 ntBASIC1.77□□□□□ -2.13
CDX4O14627 snoU13.18-201ENST00000459483 104 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AC015911.1-201ENST00000495111 156 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.77□□□□□ -2.13
CDX4O14627 SCARNA15.1-201ENST00000516384 125 ntBASIC1.77□□□□□ -2.13
CDX4O14627 RNU6-699P-201ENST00000517081 110 ntBASIC1.77□□□□□ -2.13
CDX4O14627 MRPS36P4-201ENST00000534436 298 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AC018630.3-201ENST00000542637 96 ntBASIC1.77□□□□□ -2.13
CDX4O14627 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX4O14627 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.77□□□□□ -2.13
CDX4O14627 CYP2C61P-201ENST00000604072 290 ntBASIC1.77□□□□□ -2.13
CDX4O14627 AC005014.2-201ENST00000607795 599 ntBASIC1.77□□□□□ -2.13
CDX4O14627 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.77□□□□□ -2.13
CDX4O14627 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CDX4O14627 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX4O14627 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CDX4O14627 RNU6-1115P-201ENST00000362490 106 ntBASIC1.76□□□□□ -2.13
CDX4O14627 SNORA63-201ENST00000363450 132 ntBASIC1.76□□□□□ -2.13
CDX4O14627 Y_RNA.326-201ENST00000365176 113 ntBASIC1.76□□□□□ -2.13
CDX4O14627 SNORA25B-201ENST00000365507 128 ntBASIC1.76□□□□□ -2.13
CDX4O14627 RNU6-784P-201ENST00000384330 106 ntBASIC1.76□□□□□ -2.13
CDX4O14627 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX4O14627 PMCHL1-202ENST00000423102 261 ntBASIC1.76□□□□□ -2.13
CDX4O14627 MRPS18CP6-201ENST00000423587 223 ntBASIC1.76□□□□□ -2.13
CDX4O14627 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX4O14627 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX4O14627 GPM6BP3-201ENST00000442797 145 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.76□□□□□ -2.13
CDX4O14627 AC079354.2-201ENST00000453523 154 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AL353752.1-201ENST00000454946 260 ntBASIC1.76□□□□□ -2.13
CDX4O14627 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX4O14627 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX4O14627 Y_RNA.661-201ENST00000516003 99 ntBASIC1.76□□□□□ -2.13
CDX4O14627 RNU6-264P-201ENST00000517134 104 ntBASIC1.76□□□□□ -2.13
CDX4O14627 CYCSP26-201ENST00000534107 320 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AC016256.1-201ENST00000547971 354 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AC026271.5-201ENST00000577873 130 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX4O14627 MIR3923-201ENST00000579521 83 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX4O14627 AC005899.2-201ENST00000584353 90 ntBASIC1.76□□□□□ -2.13
CDX4O14627 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.76□□□□□ -2.13
CDX4O14627 MTND5P9-201ENST00000503854 1755 ntBASIC1.76□□□□□ -2.13
CDX4O14627 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDX4O14627 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CDX4O14627 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDX4O14627 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDX4O14627 RNU6-490P-201ENST00000362985 107 ntBASIC1.75□□□□□ -2.13
CDX4O14627 RNY1P16-201ENST00000363063 111 ntBASIC1.75□□□□□ -2.13
CDX4O14627 RNU6-99P-201ENST00000364721 107 ntBASIC1.75□□□□□ -2.13
CDX4O14627 SNORA22B-201ENST00000383876 138 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.496-201ENST00000384444 101 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.504-201ENST00000384481 104 ntBASIC1.75□□□□□ -2.13
CDX4O14627 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CDX4O14627 SNORA26.3-201ENST00000391119 136 ntBASIC1.75□□□□□ -2.13
CDX4O14627 MIR1276-201ENST00000408707 83 ntBASIC1.75□□□□□ -2.13
CDX4O14627 RNU2-32P-201ENST00000411193 191 ntBASIC1.75□□□□□ -2.13
CDX4O14627 EIF4EP2-201ENST00000422816 654 ntBASIC1.75□□□□□ -2.13
CDX4O14627 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.75□□□□□ -2.13
CDX4O14627 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.75□□□□□ -2.13
CDX4O14627 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.75□□□□□ -2.13
CDX4O14627 AL118496.2-201ENST00000448300 230 ntBASIC1.75□□□□□ -2.13
CDX4O14627 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.75□□□□□ -2.13
CDX4O14627 RPL17P19-201ENST00000489069 552 ntBASIC1.75□□□□□ -2.13
CDX4O14627 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.75□□□□□ -2.13
CDX4O14627 RNU6-307P-201ENST00000516743 106 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.711-201ENST00000516993 102 ntBASIC1.75□□□□□ -2.13
CDX4O14627 AC034114.1-201ENST00000520293 285 ntBASIC1.75□□□□□ -2.13
CDX4O14627 AC087441.2-201ENST00000529141 262 ntBASIC1.75□□□□□ -2.13
CDX4O14627 AC022616.8-201ENST00000533569 253 ntBASIC1.75□□□□□ -2.13
CDX4O14627 MIR5696-201ENST00000578474 85 ntBASIC1.75□□□□□ -2.13
CDX4O14627 AC022432.1-201ENST00000595739 310 ntBASIC1.75□□□□□ -2.13
CDX4O14627 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.75□□□□□ -2.13
CDX4O14627 AL512598.1-201ENST00000610158 273 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.812-201ENST00000610788 101 ntBASIC1.75□□□□□ -2.13
CDX4O14627 Y_RNA.784-201ENST00000613803 101 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms