Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC016700.2-201ENST00000446011 156 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 NDUFB4P10-201ENST00000452541 359 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC015911.1-201ENST00000495111 156 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC103851.1-201ENST00000506833 274 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MTND3P5-201ENST00000512798 333 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU4-49P-201ENST00000516080 140 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNU6-123P-201ENST00000516163 102 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MTND2P38-201ENST00000522536 667 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AP003034.1-201ENST00000534621 422 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC024909.2-201ENST00000553035 286 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC022254.1-201ENST00000567857 235 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC008752.3-201ENST00000588113 712 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC009994.1-201ENST00000606889 253 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC015540.1-201ENST00000615828 501 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC097520.1-201ENST00000624435 385 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 AC068137.3-201ENST00000639191 341 ntBASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP276-201ENST00000362580 94 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 RNU6-74P-201ENST00000384235 107 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1274P-201ENST00000384557 107 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 TPT1P7-201ENST00000458300 517 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC079140.3-201ENST00000511111 550 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 RNU2-69P-201ENST00000516061 100 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AL442163.3-201ENST00000554110 156 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC012414.6-201ENST00000568241 401 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 MIR8074-201ENST00000615081 81 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AL078604.3-201ENST00000615580 211 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC007014.2-201ENST00000615581 479 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 SNORD113-7-201ENST00000363762 77 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 RNU6-297P-201ENST00000384636 107 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 MIR10B-201ENST00000385011 110 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 RPS26P42-201ENST00000413485 326 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AL133396.1-201ENST00000432048 687 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 MTCO2P18-201ENST00000457151 658 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC016925.1-201ENST00000458303 298 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 EIF4A1P12-201ENST00000551910 141 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 MIR3941-201ENST00000582572 103 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 NBR2-204ENST00000587322 63 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC104260.1-201ENST00000616660 539 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC139792.3-201ENST00000623525 224 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 AC024614.3-201ENST00000637860 256 ntBASIC0.62□□□□□ -2.31
COL6A6A6NMZ7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-414P-201ENST00000363705 104 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU5F-3P-201ENST00000363767 117 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-784P-201ENST00000384330 106 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1127P-201ENST00000384580 107 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 Y_RNA.549-201ENST00000384657 102 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 MTND3P9-201ENST00000429526 346 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 MTCO1P44-201ENST00000441935 243 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AL031274.1-201ENST00000450334 232 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1208P-201ENST00000459588 107 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RN7SKP298-201ENST00000515950 94 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-1146P-201ENST00000516282 102 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU2-46P-201ENST00000517038 113 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC115990.1-201ENST00000526957 301 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AL512360.1-201ENST00000555346 234 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 MIR5583-1-201ENST00000580941 59 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC063944.3-201ENST00000609969 533 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 MIR8076-201ENST00000611401 83 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 ZNF204P-201ENST00000416749 2397 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 ZNF680P1-201ENST00000436625 1469 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 SNORA69-201ENST00000383895 132 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-360P-201ENST00000390944 104 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP212-201ENST00000391223 107 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU6-510P-201ENST00000391239 108 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 EIF4E2P1-201ENST00000393781 255 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 DEFB108C-201ENST00000400154 252 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNA5SP201-201ENST00000410316 124 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC060773.1-201ENST00000421698 310 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 C8orf59P1-201ENST00000429930 303 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 MTND4P32-201ENST00000437189 1237 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 HMGN2P34-201ENST00000437647 269 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC009237.7-201ENST00000447357 229 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC074290.1-201ENST00000448883 135 ntBASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.61□□□□□ -2.31
COL6A6A6NMZ7 RNU1-131P-201ENST00000458943 161 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms