Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 AC006001.4-201ENST00000622243 395 ntBASIC1.26□□□□□ -2.21
CLRN2A0PK11 MIR338-201ENST00000636369 67 ntBASIC1.26□□□□□ -2.21
CLRN2A0PK11 AC099654.5-201ENST00000636479 350 ntBASIC1.26□□□□□ -2.21
CLRN2A0PK11 Y_RNA.1-201ENST00000352915 104 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 RNU4-66P-201ENST00000365199 138 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 MIR513A1-201ENST00000385138 129 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 AL591704.2-201ENST00000421658 181 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.25□□□□□ -2.21
CLRN2A0PK11 RNU7-34P-201ENST00000459394 64 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 RN7SKP298-201ENST00000515950 94 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 AL512310.8-201ENST00000550183 120 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 Z99497.2-201ENST00000603634 310 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 AL365434.2-201ENST00000607979 234 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 AL121757.2-201ENST00000611223 313 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 RMST_3.1-201ENST00000611651 109 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 AC009033.1-201ENST00000624279 431 ntBASIC1.25□□□□□ -2.21
CLRN2A0PK11 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.25□□□□□ -2.21
CLRN2A0PK11 FER-210ENST00000628534 558 ntTSL 5 BASIC1.25□□□□□ -2.21
CLRN2A0PK11 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CLRN2A0PK11 RNU6-1305P-201ENST00000364353 104 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 SNORA4.2-201ENST00000365313 147 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 RNU6-968P-201ENST00000384076 107 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 RNU6-1235P-201ENST00000384559 107 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 AL049545.1-201ENST00000401856 572 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 MIR1253-201ENST00000408273 105 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 AL353193.1-201ENST00000421444 268 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 MTCO2P19-201ENST00000427513 598 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 USP9YP14-201ENST00000430663 563 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 HMGN2P34-201ENST00000437647 269 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 RNU6-498P-201ENST00000459468 107 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 RNU6-1146P-201ENST00000516282 102 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 MRPS36P4-201ENST00000534436 298 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 AC026470.2-201ENST00000561492 181 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 AC011712.1-201ENST00000588959 234 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 AC068792.1-201ENST00000621354 417 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
CLRN2A0PK11 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 Y_RNA.205-201ENST00000364128 113 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 Y_RNA.393-201ENST00000383936 102 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 MIR515-2-201ENST00000384883 83 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 MIR515-1-201ENST00000384884 83 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 MIR521-1-201ENST00000384902 87 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 RNA5SP323-201ENST00000391094 133 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 PGBD4P5-201ENST00000445958 426 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 MTCO3P8-201ENST00000453691 755 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 RPS29P27-201ENST00000463711 170 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 RN7SKP88-201ENST00000516847 250 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 CENPUP1-201ENST00000526649 1202 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.23□□□□□ -2.21
CLRN2A0PK11 MZT1P2-201ENST00000604387 248 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 7SK.8-201ENST00000612110 250 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 7SK.11-201ENST00000615477 250 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 7SK.13-201ENST00000622040 250 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 AC078883.4-201ENST00000623218 367 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 AP000770.2-201ENST00000623694 100 ntBASIC1.23□□□□□ -2.21
CLRN2A0PK11 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CLRN2A0PK11 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
CLRN2A0PK11 RNA5SP259-201ENST00000365541 109 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 RNU6-1329P-201ENST00000365664 107 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 RNU6-417P-201ENST00000384712 107 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AL663109.1-201ENST00000411498 844 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.22□□□□□ -2.21
CLRN2A0PK11 MRPS10P2-201ENST00000431226 381 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 NFU1P2-201ENST00000448700 469 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC074290.1-201ENST00000448883 135 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.22□□□□□ -2.21
CLRN2A0PK11 MIR3973-201ENST00000579824 107 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC008088.1-201ENST00000580993 280 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC119751.7-201ENST00000600494 245 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.22□□□□□ -2.21
CLRN2A0PK11 Z69908.1-201ENST00000622603 247 ntBASIC1.22□□□□□ -2.21
CLRN2A0PK11 snoU2-30.2-201ENST00000362805 70 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 SNORA33-201ENST00000363664 130 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 Y_RNA.378-201ENST00000365652 113 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 RNU6-1286P-201ENST00000383871 107 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 RNU6-975P-201ENST00000384296 105 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 RNU6-933P-201ENST00000384424 107 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 RNU4-55P-201ENST00000410731 137 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 RNU6-57P-201ENST00000411348 103 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 AC092447.3-201ENST00000426027 686 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 SRRM1P2-201ENST00000464531 1192 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 SNORA19.2-201ENST00000516013 114 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.21□□□□□ -2.22
CLRN2A0PK11 CBX3P8-201ENST00000532412 525 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.21□□□□□ -2.22
CLRN2A0PK11 AL442163.3-201ENST00000554110 156 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.21□□□□□ -2.22
CLRN2A0PK11 MIR4424-201ENST00000585257 86 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.21□□□□□ -2.22
CLRN2A0PK11 AC097065.2-201ENST00000608159 533 ntBASIC1.21□□□□□ -2.22
CLRN2A0PK11 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 149.3 ms