Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RNA5SP496-201ENST00000391240 109 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 MED13P1-201ENST00000428342 171 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 MTND1P12-201ENST00000455231 147 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 snoU13.18-201ENST00000459483 104 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 AC117522.1-201ENST00000509821 380 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 RNU7-12P-201ENST00000516030 62 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 RNU7-99P-201ENST00000516271 62 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-1003P-201ENST00000517099 105 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 AC068587.4-201ENST00000533893 186 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 MIR4307-201ENST00000582802 84 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 U6.73-201ENST00000619194 103 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 AL359697.1-201ENST00000624879 587 ntBASIC-0.26□□□□□ -2.45
TCRBV3S1A0A5B6 MIR1-1-201ENST00000362147 71 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 MIRLET7C-201ENST00000362160 84 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-61P-201ENST00000365528 109 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-39P-201ENST00000384344 107 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-700P-201ENST00000391043 107 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 AL117339.3-201ENST00000418733 162 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 AC116347.2-201ENST00000514912 523 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNA5SP436-201ENST00000516020 115 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-685P-201ENST00000517088 95 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 NDUFAF4P1-201ENST00000559425 519 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 MIR5006-201ENST00000583027 110 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RMST_2.1-201ENST00000617263 136 ntBASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.27□□□□□ -2.45
TCRBV3S1A0A5B6 RNY4P24-201ENST00000362735 96 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-679P-201ENST00000391003 106 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 AL139396.1-201ENST00000421137 167 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 MTND1P20-201ENST00000430341 950 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 SEPT7P4-201ENST00000437076 306 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 RNU6-221P-201ENST00000459541 99 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 RNA5SP337-201ENST00000517007 109 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 AP001836.1-201ENST00000604675 523 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 SNORA25.18-201ENST00000607153 114 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 snoZ196.1-201ENST00000625269 89 ntBASIC-0.28□□□□□ -2.45
TCRBV3S1A0A5B6 MIR499A-201ENST00000384903 122 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 SNORD71-201ENST00000411292 86 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 AC008134.1-201ENST00000420943 193 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 MRPS10P2-201ENST00000431226 381 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 MTATP6P16-201ENST00000434543 526 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 AC009237.7-201ENST00000447357 229 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 snoU13.6-201ENST00000458785 104 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 AC027288.2-201ENST00000553028 243 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 MIR5190-201ENST00000581537 80 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 RBM11P1-201ENST00000604951 799 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 AL031667.3-201ENST00000620124 655 ntBASIC-0.29□□□□□ -2.46
TCRBV3S1A0A5B6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC005592.1-201ENST00000566527 1640 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-654P-201ENST00000364373 107 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-1303P-201ENST00000364841 107 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 MIR520G-201ENST00000385064 90 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 MIR520H-201ENST00000385126 88 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RNA5SP63-201ENST00000391225 112 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 MTCO3P8-201ENST00000453691 755 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 SNRPGP9-201ENST00000456025 225 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RNU7-94P-201ENST00000459576 63 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 HMGN2P26-201ENST00000463169 339 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RPS3AP17-201ENST00000472594 777 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 RNU7-41P-201ENST00000515917 61 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC087894.1-201ENST00000538359 518 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC141557.1-201ENST00000540982 400 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 AC012467.1-201ENST00000607740 256 ntBASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 IST1-227ENST00000626438 126 ntTSL 5 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-0.3□□□□□ -2.46
TCRBV3S1A0A5B6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 MIR1302-7-201ENST00000408841 72 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC022616.6-201ENST00000520479 119 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC016957.1-201ENST00000534895 309 ntBASIC-0.31□□□□□ -2.46
TCRBV3S1A0A5B6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms