Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 MIR4764-201ENST00000580680 88 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC108747.1-201ENST00000609508 535 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AC007684.1-201ENST00000609671 477 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AL136221.1-201ENST00000621449 509 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 AL359697.1-201ENST00000624879 587 ntBASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.35□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR613-201ENST00000385248 95 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 SNORA40.2-201ENST00000390847 128 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 SNORA75.6-201ENST00000391318 127 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RPS29P13-201ENST00000402041 169 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RNA5SP127-201ENST00000411051 133 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AC012306.1-201ENST00000423267 114 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AL590632.1-201ENST00000424289 371 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AL358176.2-201ENST00000425769 204 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AL117351.1-201ENST00000438864 766 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU7-94P-201ENST00000459576 63 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 HMGN1P10-201ENST00000474557 553 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU7-12P-201ENST00000516030 62 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-123P-201ENST00000516163 102 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU11-2P-201ENST00000516898 142 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AC073539.2-201ENST00000597113 165 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 MTATP6P2-201ENST00000603319 678 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AL596327.1-201ENST00000603629 213 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 AP002360.4-201ENST00000606980 481 ntBASIC-0.36□□□□□ -2.47
TRAV1-2A0A0B4J238 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 SNORA8.2-201ENST00000384372 139 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR610-201ENST00000385139 96 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR1197-201ENST00000408818 88 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 USP9YP11-201ENST00000427537 717 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU7-57P-201ENST00000459540 60 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 RNA5SP94-201ENST00000516917 108 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AP003049.1-201ENST00000529418 457 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR5692A1-201ENST00000580523 69 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR544B-201ENST00000582372 78 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AC112187.2-201ENST00000604345 283 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 U6.73-201ENST00000619194 103 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 SNORA43.4-201ENST00000629559 138 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 AL445523.1-201ENST00000451184 1362 ntBASIC-0.37□□□□□ -2.47
TRAV1-2A0A0B4J238 MIRLET7C-201ENST00000362160 84 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 SNORA9.1-201ENST00000362412 131 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-428P-201ENST00000362942 107 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR586-201ENST00000385035 97 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR520G-201ENST00000385064 90 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR520H-201ENST00000385126 88 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AC114491.1-201ENST00000416095 246 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AL353777.1-201ENST00000425552 326 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AL392103.1-201ENST00000447000 198 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 RNA5SP216-201ENST00000516111 123 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 Y_RNA.670-201ENST00000516255 105 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR4743-201ENST00000584576 69 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 BNIP3P26-201ENST00000600827 554 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AL139286.2-201ENST00000606838 396 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AC245297.2-201ENST00000610119 565 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR8076-201ENST00000611401 83 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AC138749.5-201ENST00000611461 208 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AC005562.2-201ENST00000618264 111 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 AC011155.2-201ENST00000623202 216 ntBASIC-0.38□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-25P-201ENST00000383873 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-756P-201ENST00000383997 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-48P-201ENST00000384161 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-15P-201ENST00000384534 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-29P-201ENST00000384637 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 MIR548H2-201ENST00000408874 88 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU2-59P-201ENST00000410482 191 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC004866.1-201ENST00000411748 78 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC004386.2-201ENST00000441858 148 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 RNU6-221P-201ENST00000459541 99 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 TRBVB-201ENST00000477100 408 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC079395.1-201ENST00000510981 262 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 MTCO3P27-201ENST00000514397 196 ntBASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.39□□□□□ -2.47
TRAV1-2A0A0B4J238 uc_338.6-201ENST00000613544 171 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms