Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 AL022345.2-201ENST00000606307 135 ntBASIC3.15□□□□□ -1.91
U3KQE9 AC096577.2-201ENST00000611455 153 ntBASIC3.15□□□□□ -1.91
U3KQE9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
U3KQE9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
U3KQE9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
U3KQE9 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
U3KQE9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
U3KQE9 AL355596.1-201ENST00000565399 3996 ntBASIC3.14□□□□□ -1.91
U3KQE9 RNU1-22P-201ENST00000363334 158 ntBASIC3.14□□□□□ -1.91
U3KQE9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.14□□□□□ -1.91
U3KQE9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.14□□□□□ -1.91
U3KQE9 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
U3KQE9 RN7SKP284-201ENST00000411002 343 ntBASIC3.14□□□□□ -1.91
U3KQE9 RNA5SP306-201ENST00000411087 107 ntBASIC3.14□□□□□ -1.91
U3KQE9 Z98742.2-201ENST00000431564 187 ntBASIC3.14□□□□□ -1.91
U3KQE9 MTCO1P44-201ENST00000441935 243 ntBASIC3.14□□□□□ -1.91
U3KQE9 AC016717.1-201ENST00000448918 286 ntBASIC3.14□□□□□ -1.91
U3KQE9 RN7SL738P-201ENST00000470264 297 ntBASIC3.14□□□□□ -1.91
U3KQE9 RPL21P129-201ENST00000491732 478 ntBASIC3.14□□□□□ -1.91
U3KQE9 AC091167.1-201ENST00000492017 396 ntBASIC3.14□□□□□ -1.91
U3KQE9 RPS29P21-201ENST00000496272 170 ntBASIC3.14□□□□□ -1.91
U3KQE9 AC097462.1-201ENST00000514125 324 ntBASIC3.14□□□□□ -1.91
U3KQE9 RNU6-781P-201ENST00000516377 101 ntBASIC3.14□□□□□ -1.91
U3KQE9 Y_RNA.677-201ENST00000516401 85 ntBASIC3.14□□□□□ -1.91
U3KQE9 RNU6-365P-201ENST00000517113 106 ntBASIC3.14□□□□□ -1.91
U3KQE9 TVP23BP1-201ENST00000557500 617 ntBASIC3.14□□□□□ -1.91
U3KQE9 MIR4330-201ENST00000579077 105 ntBASIC3.14□□□□□ -1.91
U3KQE9 MIR5582-201ENST00000579697 68 ntBASIC3.14□□□□□ -1.91
U3KQE9 MIR7151-201ENST00000617477 60 ntBASIC3.14□□□□□ -1.91
U3KQE9 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.14□□□□□ -1.91
U3KQE9 MIR4727-201ENST00000622232 55 ntBASIC3.14□□□□□ -1.91
U3KQE9 MIR3653-201ENST00000625572 110 ntBASIC3.14□□□□□ -1.91
U3KQE9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
U3KQE9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
U3KQE9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
U3KQE9 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.14□□□□□ -1.91
U3KQE9 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.14□□□□□ -1.91
U3KQE9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.14□□□□□ -1.91
U3KQE9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.14□□□□□ -1.91
U3KQE9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.14□□□□□ -1.91
U3KQE9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
U3KQE9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.13□□□□□ -1.91
U3KQE9 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
U3KQE9 RNU6-309P-201ENST00000364573 106 ntBASIC3.13□□□□□ -1.91
U3KQE9 RNU6-1292P-201ENST00000383856 107 ntBASIC3.13□□□□□ -1.91
U3KQE9 MIR1183-201ENST00000408856 89 ntBASIC3.13□□□□□ -1.91
U3KQE9 RNA5SP136-201ENST00000410906 107 ntBASIC3.13□□□□□ -1.91
U3KQE9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.13□□□□□ -1.91
U3KQE9 AC004552.1-201ENST00000419089 348 ntBASIC3.13□□□□□ -1.91
U3KQE9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.13□□□□□ -1.91
U3KQE9 AC018634.1-201ENST00000437554 401 ntBASIC3.13□□□□□ -1.91
U3KQE9 RPS26P3-201ENST00000470205 348 ntBASIC3.13□□□□□ -1.91
U3KQE9 RN7SL481P-201ENST00000477764 299 ntBASIC3.13□□□□□ -1.91
U3KQE9 AC090543.2-201ENST00000483963 348 ntBASIC3.13□□□□□ -1.91
U3KQE9 AC004057.1-201ENST00000485827 348 ntBASIC3.13□□□□□ -1.91
U3KQE9 RPS26P15-201ENST00000488067 348 ntBASIC3.13□□□□□ -1.91
U3KQE9 ATP5EP1-201ENST00000510257 156 ntBASIC3.13□□□□□ -1.91
U3KQE9 RAC1P2-201ENST00000511164 579 ntBASIC3.13□□□□□ -1.91
U3KQE9 RNU6-504P-201ENST00000516568 104 ntBASIC3.13□□□□□ -1.91
U3KQE9 RNU7-149P-201ENST00000516739 59 ntBASIC3.13□□□□□ -1.91
U3KQE9 RNU6-844P-201ENST00000517175 102 ntBASIC3.13□□□□□ -1.91
U3KQE9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
U3KQE9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
U3KQE9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.13□□□□□ -1.91
U3KQE9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.13□□□□□ -1.91
U3KQE9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
U3KQE9 JPX_2.1-201ENST00000614161 69 ntBASIC3.13□□□□□ -1.91
U3KQE9 AC114781.5-201ENST00000615297 108 ntBASIC3.13□□□□□ -1.91
U3KQE9 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.13□□□□□ -1.91
U3KQE9 MTND5P18-201ENST00000445624 1801 ntBASIC3.13□□□□□ -1.91
U3KQE9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.13□□□□□ -1.91
U3KQE9 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
U3KQE9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
U3KQE9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.13□□□□□ -1.91
U3KQE9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
U3KQE9 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
U3KQE9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
U3KQE9 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
U3KQE9 AC018555.1-201ENST00000567548 1980 ntBASIC3.12□□□□□ -1.91
U3KQE9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
U3KQE9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.12□□□□□ -1.91
U3KQE9 MAPK10-253ENST00000641010 4072 ntBASIC3.12□□□□□ -1.91
U3KQE9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
U3KQE9 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
U3KQE9 RNU6-1209P-201ENST00000363655 107 ntBASIC3.12□□□□□ -1.91
U3KQE9 MIR585-201ENST00000384887 94 ntBASIC3.12□□□□□ -1.91
U3KQE9 RNA5SP252-201ENST00000391131 119 ntBASIC3.12□□□□□ -1.91
U3KQE9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.12□□□□□ -1.91
U3KQE9 RPS4XP11-201ENST00000446897 772 ntBASIC3.12□□□□□ -1.91
U3KQE9 AL021397.1-201ENST00000451806 248 ntBASIC3.12□□□□□ -1.91
U3KQE9 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.12□□□□□ -1.91
U3KQE9 RPS23P1-201ENST00000491662 432 ntBASIC3.12□□□□□ -1.91
U3KQE9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.12□□□□□ -1.91
U3KQE9 RNA5SP309-201ENST00000516670 106 ntBASIC3.12□□□□□ -1.91
U3KQE9 AC027419.1-201ENST00000522976 328 ntBASIC3.12□□□□□ -1.91
U3KQE9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.12□□□□□ -1.91
U3KQE9 MIR4443-201ENST00000585052 53 ntBASIC3.12□□□□□ -1.91
U3KQE9 AC008745.1-201ENST00000604064 271 ntBASIC3.12□□□□□ -1.91
U3KQE9 Pinc.1-201ENST00000616452 154 ntBASIC3.12□□□□□ -1.91
U3KQE9 MIR8059-201ENST00000620427 81 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms