Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC026470.2-201ENST00000561492 181 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 AC016597.2-201ENST00000613256 341 ntBASIC0.73□□□□□ -2.29
USH1CQ9Y6N9 MIR373-201ENST00000362273 69 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 Y_RNA.560-201ENST00000384689 102 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 MIR19B1-201ENST00000384829 87 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 RNU6-1106P-201ENST00000390845 107 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 RNU2-64P-201ENST00000411315 191 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 PIGFP2-201ENST00000421400 651 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 TIMM9P3-201ENST00000428659 274 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 AL606517.2-201ENST00000442855 241 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 AC092991.1-201ENST00000477176 376 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 RPL39P5-202ENST00000512505 151 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 AC106038.2-201ENST00000520706 568 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 RNU6-323P-201ENST00000521915 107 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 AC004817.2-201ENST00000561794 651 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 MIR3941-201ENST00000582572 103 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 BNIP3P39-201ENST00000601077 554 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.72□□□□□ -2.29
USH1CQ9Y6N9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU4-79P-201ENST00000362764 141 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU6-1305P-201ENST00000364353 104 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 Y_RNA.399-201ENST00000383955 105 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU6-456P-201ENST00000384493 107 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 SNORA40.3-201ENST00000390964 122 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU6-57P-201ENST00000411348 103 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 MTCO2P3-201ENST00000442543 421 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC074290.1-201ENST00000448883 135 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC022364.2-201ENST00000457963 554 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 SNORD124-201ENST00000459577 104 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 GMFBP1-201ENST00000467831 427 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC048334.1-201ENST00000477975 159 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 SNORA31.10-201ENST00000516482 106 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 RNU6-922P-201ENST00000516753 99 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC016256.1-201ENST00000547971 354 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC009094.1-201ENST00000564443 426 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AL391840.1-201ENST00000571144 367 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 MIR3973-201ENST00000579824 107 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC090616.2-202ENST00000584248 222 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AP000907.4-201ENST00000604143 237 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AC097065.2-201ENST00000608159 533 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 AP001506.1-201ENST00000615444 211 ntBASIC0.71□□□□□ -2.3
USH1CQ9Y6N9 Y_RNA.354-201ENST00000365448 111 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RNU6-297P-201ENST00000384636 107 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RNU6-248P-201ENST00000410720 107 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC063976.4-201ENST00000421971 163 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 CYCSP46-201ENST00000423569 204 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AL033528.1-201ENST00000453780 140 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RNU7-167P-201ENST00000459160 62 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC105417.1-201ENST00000514691 285 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RNA5SP168-201ENST00000516642 112 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RN7SKP49-201ENST00000516675 260 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RNU1-142P-201ENST00000516682 145 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 RNU6-612P-201ENST00000516909 102 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 CYP3A137P-201ENST00000562436 69 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 MIR5695-201ENST00000579717 85 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC146944.4-201ENST00000602697 718 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC011458.1-201ENST00000604034 617 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 U2.17-201ENST00000611454 95 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC106754.2-201ENST00000623006 233 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 AC079248.2-201ENST00000623779 326 ntBASIC0.7□□□□□ -2.3
USH1CQ9Y6N9 SNORD114-24-201ENST00000365029 72 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 MIR613-201ENST00000385248 95 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AL031577.2-201ENST00000404133 280 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 RNU2-29P-201ENST00000410423 189 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 RN7SKP200-201ENST00000410564 320 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC114482.1-201ENST00000418010 247 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC009237.7-201ENST00000447357 229 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 MTCO3P8-201ENST00000453691 755 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 RNU7-57P-201ENST00000459540 60 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 MIR5000-201ENST00000577717 103 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC245014.2-201ENST00000603689 287 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC246785.4-201ENST00000605374 287 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.69□□□□□ -2.3
USH1CQ9Y6N9 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.68□□□□□ -2.3
USH1CQ9Y6N9 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
USH1CQ9Y6N9 RNU4-21P-201ENST00000362802 126 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms