Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
HCFC2Q9Y5Z7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC010680.1-201ENST00000590024 3590 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC000403.1-201ENST00000613696 3585 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.329-201ENST00000365209 107 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.412-201ENST00000384001 104 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.488-201ENST00000384403 102 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.497-201ENST00000384447 98 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 U3.40-201ENST00000408706 208 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AL162725.1-201ENST00000435405 301 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AL714022.1-201ENST00000439897 151 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC103975.1-201ENST00000482506 483 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-237P-201ENST00000515985 71 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC100767.1-201ENST00000528178 123 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 TGIF1P1-201ENST00000558095 802 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 AC027176.1-201ENST00000560204 514 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 RPS15AP11-201ENST00000594193 385 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 PCGEM1.1-201ENST00000613431 131 ntBASIC3.32□□□□□ -1.88
HCFC2Q9Y5Z7 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-275P-201ENST00000364910 107 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.357-201ENST00000365487 109 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-19P-201ENST00000384718 107 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AC023141.4-201ENST00000412031 328 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AL441985.1-201ENST00000457727 251 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 MIR2276-201ENST00000516886 89 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AC136628.3-201ENST00000521868 290 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 EIF4A1P12-201ENST00000551910 141 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 SNORD11B-201ENST00000607707 90 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AL138880.2-201ENST00000616214 239 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 AC093010.3-201ENST00000570269 15214 ntBASIC3.31□□□□□ -1.88
HCFC2Q9Y5Z7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 MIR449A-201ENST00000362113 91 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.215-201ENST00000364204 112 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-454P-201ENST00000364292 107 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 SNORD15B-201ENST00000384714 146 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-131P-201ENST00000391144 107 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 AL591034.1-201ENST00000407447 340 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU2-2P-201ENST00000410396 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-710P-201ENST00000410424 105 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 EEF1A1P41-201ENST00000414667 207 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 EBAG9P1-201ENST00000418955 543 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU7-23P-201ENST00000459465 62 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU7-121P-201ENST00000516604 62 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU2-4P-201ENST00000606190 192 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.15-201ENST00000611544 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.16-201ENST00000613119 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.12-201ENST00000613778 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 TCL6_2.1-201ENST00000615162 119 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.9-201ENST00000615427 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.11-201ENST00000616345 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.2-201ENST00000616535 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.3-201ENST00000617785 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.19-201ENST00000618602 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 RNU2-1-201ENST00000618664 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.6-201ENST00000619225 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.5-201ENST00000619465 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 U2.10-201ENST00000620268 191 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 AC068205.3-201ENST00000636385 468 ntBASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
HCFC2Q9Y5Z7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-727P-201ENST00000363592 107 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-103P-201ENST00000363686 107 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.182-201ENST00000363880 111 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-763P-201ENST00000390865 106 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-239P-201ENST00000390990 99 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6-381P-201ENST00000391259 108 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 AIMP1P2-201ENST00000425294 312 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 TOMM22P2-201ENST00000430735 237 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 AL139132.1-201ENST00000431587 344 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 AC091179.1-201ENST00000461606 579 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 AP002884.2-201ENST00000471647 395 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 AC091826.1-201ENST00000514065 313 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 RN7SKP164-201ENST00000516138 266 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 GTF3AP2-201ENST00000557014 266 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 MIR3684-201ENST00000579779 74 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 MIR3162-201ENST00000581818 82 ntBASIC3.29□□□□□ -1.88
HCFC2Q9Y5Z7 AC005562.2-201ENST00000618264 111 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms