Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC125232.2-201ENST00000592457 143 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 AC138915.1-201ENST00000565427 1685 ntBASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
NR2E3Q9Y5X4 RNU6-222P-201ENST00000362438 107 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.27-201ENST00000362540 103 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.152-201ENST00000363578 100 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-137P-201ENST00000363680 108 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.226-201ENST00000364337 114 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.458-201ENST00000384240 102 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 U8.10-201ENST00000384260 133 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-611P-201ENST00000384276 104 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RN7SKP223-201ENST00000410582 62 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 MTCO3P19-201ENST00000415864 321 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RPL30P4-201ENST00000429309 333 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AL356320.1-201ENST00000429616 163 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AC108059.2-201ENST00000434626 151 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 PCNPP5-201ENST00000452246 481 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AP000705.1-201ENST00000454567 350 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 snoU13.6-201ENST00000458785 104 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-408P-201ENST00000515910 100 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-397P-201ENST00000516226 104 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AC091144.1-201ENST00000519573 138 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AC109329.2-201ENST00000519658 482 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 RPL30P11-203ENST00000598995 310 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AL390123.1-201ENST00000603216 237 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 AL138963.2-201ENST00000605137 226 ntBASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
NR2E3Q9Y5X4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-770P-201ENST00000363929 105 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.518-201ENST00000384552 113 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.526-201ENST00000384572 110 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.556-201ENST00000384677 113 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 MIR512-1-201ENST00000384913 84 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 MIR487A-201ENST00000385009 80 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 SNORD88.1-201ENST00000408684 91 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 RNA5SP201-201ENST00000410316 124 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AC009963.1-201ENST00000417265 157 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AC080013.2-201ENST00000460866 323 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AC025465.3-201ENST00000510570 311 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AC067942.3-201ENST00000512025 362 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AC023157.2-201ENST00000540596 141 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AC105245.1-201ENST00000581934 244 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 MIR3199-1-201ENST00000582434 88 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 AL670379.2-201ENST00000604983 252 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 U6.92-201ENST00000636464 89 ntBASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NR2E3Q9Y5X4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3□□□□□ -1.93
NR2E3Q9Y5X4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NR2E3Q9Y5X4 RNU4-15P-201ENST00000362613 141 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 SNORD115-8-201ENST00000363856 82 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 SNORD115-38-201ENST00000365037 82 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.319-201ENST00000365138 92 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.376-201ENST00000365638 108 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.471-201ENST00000384312 102 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.483-201ENST00000384380 101 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 RNY3P4-201ENST00000384428 101 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 MIR181B1-201ENST00000385240 110 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 RPS15AP7-201ENST00000439294 405 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3□□□□□ -1.93
NR2E3Q9Y5X4 LINC01399-202ENST00000458450 244 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 AC073901.1-201ENST00000462471 408 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 MTND1P19-201ENST00000511780 315 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.680-201ENST00000516441 93 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 MIR2355-201ENST00000517199 87 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 AC027288.2-201ENST00000553028 243 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 AC090617.3-201ENST00000573670 475 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 MIR3616-201ENST00000584070 92 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 AC069294.1-201ENST00000608397 350 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3□□□□□ -1.93
NR2E3Q9Y5X4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3□□□□□ -1.93
NR2E3Q9Y5X4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3□□□□□ -1.93
NR2E3Q9Y5X4 AC069528.2-201ENST00000624849 1991 ntBASIC3□□□□□ -1.93
NR2E3Q9Y5X4 RNA5SP289-201ENST00000362332 137 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.19-201ENST00000362462 99 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-1301P-201ENST00000362724 104 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 RNU1-76P-201ENST00000362903 159 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.188-201ENST00000363952 111 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.307-201ENST00000365022 117 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 RNU6-541P-201ENST00000384709 110 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 MIR29B2-201ENST00000385055 81 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 MIR628-201ENST00000385229 95 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 MIR208B-201ENST00000401172 77 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 Y_RNA.618-201ENST00000410949 107 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 EIF1P2-201ENST00000428233 350 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 AC140059.1-201ENST00000489238 361 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 RNA5SP54-201ENST00000516951 92 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 AC062037.2-201ENST00000610137 73 ntBASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
NR2E3Q9Y5X4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms