Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SNX9Q9Y5X1 AC005336.3-201ENST00000623833 2679 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 OR56A5-201ENST00000340110 738 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 RNU6-655P-201ENST00000362858 107 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 U8.2-201ENST00000363156 134 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 SNORD115-8-201ENST00000363856 82 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 RNA5SP125-201ENST00000364843 120 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 SNORD115-38-201ENST00000365037 82 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.557-201ENST00000384680 107 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 RN7SKP223-201ENST00000410582 62 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 AC113618.1-201ENST00000416747 285 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 MTND2P23-201ENST00000422990 651 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 RPL22P13-201ENST00000493291 347 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 GNAI2P1-201ENST00000541815 315 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 CYP4A27P-201ENST00000567218 190 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 PCGEM1.1-201ENST00000613431 131 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 ZNF72P-201ENST00000425869 1908 ntBASIC2.38□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.358-201ENST00000365491 99 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 RNU6-639P-201ENST00000384074 107 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 SNORA70B-201ENST00000384210 135 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 RNU6-378P-201ENST00000384324 107 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC007215.1-201ENST00000464893 276 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 RNU6-327P-201ENST00000516270 127 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.706-201ENST00000516933 99 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 RNU6-58P-201ENST00000517143 103 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC023442.1-201ENST00000531247 422 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 MIR3945-201ENST00000581853 98 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC006504.6-201ENST00000590142 199 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 MIR6840-201ENST00000611937 71 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 AC005592.1-201ENST00000566527 1640 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 MTND5P16-201ENST00000460269 1703 ntBASIC2.37□□□□□ -2.03
SNX9Q9Y5X1 RNU6-222P-201ENST00000362438 107 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 Y_RNA.39-201ENST00000362620 98 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC117470.1-201ENST00000381974 330 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RNU6-708P-201ENST00000384217 107 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 MIR153-2-201ENST00000385225 87 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 SNORA69.1-201ENST00000390904 137 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 snosnR66.1-201ENST00000391095 99 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RNU6-985P-201ENST00000410182 104 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RNU7-169P-201ENST00000459456 61 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AP000870.1-201ENST00000472927 406 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RNU1-41P-201ENST00000516161 162 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RNU1-48P-201ENST00000516400 162 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RNU6-911P-201ENST00000516523 104 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 SNORA40.14-201ENST00000516543 86 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC144568.1-201ENST00000520139 137 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 MIR3923-201ENST00000579521 83 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 RPL30P11-203ENST00000598995 310 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 7SK.7-201ENST00000603504 247 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 PART1_1.1-201ENST00000611761 217 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 U4atac.1-201ENST00000618345 95 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC137590.2-201ENST00000619709 240 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 AC009831.4-201ENST00000620744 325 ntBASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNX9Q9Y5X1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 RNU6-137P-201ENST00000363680 108 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 SNORA6-201ENST00000384033 151 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 SNORA51.11-201ENST00000384442 131 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 RNU6-823P-201ENST00000391042 103 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 RNU6-159P-201ENST00000391080 106 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 RNU1-139P-201ENST00000391307 165 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 DPH3P2-201ENST00000422618 250 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 OOSP1P1-201ENST00000423265 274 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 EIF1P2-201ENST00000428233 350 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 WARS2P1-201ENST00000429678 537 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 AC096638.1-201ENST00000444678 216 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 RNU6-567P-201ENST00000516746 107 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 CBX3P7-201ENST00000532876 502 ntBASIC2.35□□□□□ -2.03
SNX9Q9Y5X1 AC090617.3-201ENST00000573670 475 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms