Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 Y_RNA.82-201ENST00000363000 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.92-201ENST00000363043 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.180-201ENST00000363867 113 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.235-201ENST00000364412 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.306-201ENST00000365015 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.312-201ENST00000365089 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.322-201ENST00000365151 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-1199P-201ENST00000411249 104 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC027124.2-201ENST00000428249 105 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.650-201ENST00000459002 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC083906.5-201ENST00000503722 328 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.777-201ENST00000516982 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 DEFB131C-201ENST00000528817 165 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AP002001.1-203ENST00000534002 267 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 CBX3P4-201ENST00000538909 354 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 RPL21P9-201ENST00000556149 474 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.771-201ENST00000598668 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.789-201ENST00000622480 102 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 AC091932.3-201ENST00000624223 323 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 MIR3674-201ENST00000636576 68 ntBASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHA2Q9Y5H9 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.292-201ENST00000364904 97 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.415-201ENST00000384012 112 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-851P-201ENST00000384565 107 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 RNA5SP354-201ENST00000391247 136 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 SNORA11.2-201ENST00000408318 127 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 RNU2-54P-201ENST00000410299 190 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-651P-201ENST00000411040 105 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 RNU2-61P-201ENST00000411069 191 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.793-201ENST00000411222 111 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.626-201ENST00000411288 95 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AC097463.2-201ENST00000421074 142 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AC009414.1-201ENST00000427200 443 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AC004386.2-201ENST00000441858 148 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 AC011921.3-201ENST00000605540 361 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 XIST_intron.1-201ENST00000619444 68 ntBASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHA2Q9Y5H9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 AC007256.1-201ENST00000392253 2765 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 AL359854.1-201ENST00000614203 1594 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.590-201ENST00000410140 107 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 Z98742.2-201ENST00000431564 187 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 AC009237.7-201ENST00000447357 229 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 SNORD116-28-201ENST00000516123 91 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 SNORD59.2-201ENST00000516873 68 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PCDHA2Q9Y5H9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AC092593.1-201ENST00000515413 1815 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.150-201ENST00000363562 102 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 SNORA5B-201ENST00000363786 132 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.270-201ENST00000364693 104 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 SNORA18.2-201ENST00000383865 132 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-886P-201ENST00000384319 105 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 RNA5SP274-201ENST00000410484 108 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 RNA5SP475-201ENST00000410568 110 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AC009963.1-201ENST00000417265 157 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 EIF4EP4-201ENST00000424916 578 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AL135938.1-201ENST00000443141 297 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 UBE2DNL-203ENST00000474922 222 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 RN7SL633P-201ENST00000488974 297 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 Y_RNA.679-201ENST00000516416 91 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 RNA5SP367-201ENST00000516557 118 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AL512605.2-201ENST00000592972 256 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 SNORD11B-201ENST00000607707 90 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 AC096644.4-201ENST00000563417 2912 ntBASIC3.29□□□□□ -1.88
PCDHA2Q9Y5H9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-1264P-201ENST00000383891 107 ntBASIC3.28□□□□□ -1.88
PCDHA2Q9Y5H9 RNU6-1289P-201ENST00000384431 106 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms