Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 AL356280.1-201ENST00000603614 379 ntBASIC3.09□□□□□ -1.91
PCDHA9Q9Y5H5 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.09□□□□□ -1.92
PCDHA9Q9Y5H5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.243-201ENST00000364481 109 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 SNORD31B-201ENST00000364977 69 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.785-201ENST00000384290 109 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 MIR183-201ENST00000384958 110 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 MT-TR-201ENST00000387439 65 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 AL139156.1-201ENST00000412785 841 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 AC074290.1-201ENST00000448883 135 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 EEF1B2P7-201ENST00000451177 676 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 AC114982.1-201ENST00000469402 321 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-138P-201ENST00000515952 107 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-436P-201ENST00000516171 114 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.08□□□□□ -1.92
PCDHA9Q9Y5H5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MAPK10-266ENST00000641066 6555 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-545P-201ENST00000362681 104 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.82-201ENST00000363000 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.92-201ENST00000363043 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.235-201ENST00000364412 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.306-201ENST00000365015 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.312-201ENST00000365089 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.322-201ENST00000365151 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-546P-201ENST00000383991 107 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR1185-2-201ENST00000408687 86 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 U3.40-201ENST00000408706 208 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC024067.1-201ENST00000426199 223 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.650-201ENST00000459002 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 CKS1BP2-201ENST00000497342 240 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.777-201ENST00000516982 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 SNORA48.11-201ENST00000517015 89 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC022616.8-201ENST00000533569 253 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC022080.3-201ENST00000544433 482 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 RPL21P9-201ENST00000556149 474 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR1254-2-201ENST00000579553 63 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR4429-201ENST00000580105 73 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR4444-1-201ENST00000581696 74 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR4282-201ENST00000583613 67 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR4444-2-201ENST00000584390 74 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MIR4753-201ENST00000585119 83 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.771-201ENST00000598668 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.789-201ENST00000622480 102 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 U6.105-201ENST00000637379 88 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC138915.1-201ENST00000565427 1685 ntBASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
PCDHA9Q9Y5H5 AC009487.4-201ENST00000624969 3585 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.200-201ENST00000364018 102 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-461P-201ENST00000364195 107 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 RN7SKP27-201ENST00000410684 333 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 RNU2-63P-201ENST00000410792 194 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 SUMO1P2-201ENST00000452524 304 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 RPS29P26-201ENST00000477483 171 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 AC006483.1-201ENST00000487308 313 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 RPL21P129-201ENST00000491732 478 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 RNU6-191P-201ENST00000516295 94 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 AC130289.1-201ENST00000577321 73 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 AC008739.3-201ENST00000603262 127 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.06□□□□□ -1.92
PCDHA9Q9Y5H5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.76-201ENST00000362931 109 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.122-201ENST00000363331 96 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 SNORD115-30-201ENST00000364117 82 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 Y_RNA.329-201ENST00000365209 107 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 MIR670-201ENST00000390142 98 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 SNORA48.7-201ENST00000391302 135 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 RNU2-32P-201ENST00000411193 191 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 AL139281.1-201ENST00000422120 335 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 COX6CP14-201ENST00000469580 174 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 ATP5EP1-201ENST00000510257 156 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 MIR2682-201ENST00000580305 110 ntBASIC3.05□□□□□ -1.92
PCDHA9Q9Y5H5 AC019176.2-201ENST00000611579 315 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms