Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 RNU2-7P-201ENST00000410794 178 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 HMGN1P12-201ENST00000499125 195 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.18□□□□□ -2.22
SHANK1Q9Y566 AC107953.1-201ENST00000522216 297 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.18□□□□□ -2.22
SHANK1Q9Y566 AC022616.8-201ENST00000533569 253 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.18□□□□□ -2.22
SHANK1Q9Y566 AC109446.1-201ENST00000566172 220 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 MIR3688-2-201ENST00000636963 87 ntBASIC1.18□□□□□ -2.22
SHANK1Q9Y566 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.18□□□□□ -2.22
SHANK1Q9Y566 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.18□□□□□ -2.22
SHANK1Q9Y566 RNU6-428P-201ENST00000362942 107 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.248-201ENST00000364501 109 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 RNU6-1303P-201ENST00000364841 107 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.393-201ENST00000383936 102 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.458-201ENST00000384240 102 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 USMG5P1-201ENST00000425964 177 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC114982.1-201ENST00000469402 321 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC114801.2-201ENST00000503825 781 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 RNU6-1332P-201ENST00000516666 104 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 RNU6-612P-201ENST00000516909 102 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AP005639.2-201ENST00000527592 928 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC025423.5-201ENST00000550230 219 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC026271.5-201ENST00000577873 130 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC008555.8-201ENST00000623602 2168 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 RNU6-593P-201ENST00000364716 112 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 MIR517A-201ENST00000385001 87 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 SNORD115-47-201ENST00000391226 86 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.599-201ENST00000410489 109 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 RNA5SP450-201ENST00000411206 102 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 VN1R36P-201ENST00000414936 291 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 CYP2C59P-201ENST00000457790 269 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 SNORA31.25-201ENST00000517242 134 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 SCOCP1-201ENST00000554676 349 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AL031274.2-201ENST00000599419 203 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC009994.1-201ENST00000606889 253 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AC133104.2-201ENST00000615272 193 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 AL132822.1-201ENST00000617063 513 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.17□□□□□ -2.22
SHANK1Q9Y566 MIR10B-201ENST00000385011 110 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 RPL37P10-201ENST00000412884 288 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 NCOR1P3-201ENST00000420479 303 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 MRPS10P2-201ENST00000431226 381 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 MTATP6P13-201ENST00000438531 667 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 NDUFB4P10-201ENST00000452541 359 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 SNORA4.4-201ENST00000515921 135 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 RNU6-1038P-201ENST00000516516 104 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 AC005668.1-201ENST00000571142 476 ntBASIC1.16□□□□□ -2.22
SHANK1Q9Y566 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.16□□□□□ -2.22
SHANK1Q9Y566 CBX3P1-201ENST00000325243 554 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.332-201ENST00000365271 113 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 RNU6-160P-201ENST00000384591 107 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 RNU11-3P-201ENST00000391111 133 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.615-201ENST00000410769 117 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 AL590135.1-201ENST00000422215 156 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 AC019205.3-201ENST00000424573 156 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 CBX3P6-201ENST00000430257 527 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 GPM6BP3-201ENST00000442797 145 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 AC016700.2-201ENST00000446011 156 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 AC015911.1-201ENST00000495111 156 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 RPS23P5-201ENST00000495419 428 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.15□□□□□ -2.22
SHANK1Q9Y566 ACA59.1-201ENST00000515966 143 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 Y_RNA.681-201ENST00000516445 113 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 MIR5696-201ENST00000578474 85 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 Z98751.3-201ENST00000604447 521 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 U6atac.1-201ENST00000616025 117 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 AC009248.2-201ENST00000619826 254 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 SDR42E1P4-201ENST00000620894 481 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 TPTEP1-208ENST00000636884 213 ntBASIC1.15□□□□□ -2.22
SHANK1Q9Y566 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SHANK1Q9Y566 RNU4-15P-201ENST00000362613 141 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms