Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.398-201ENST00000383952 99 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 MIR1183-201ENST00000408856 89 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 RN7SKP220-201ENST00000410611 288 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC009487.2-201ENST00000420969 6821 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC027124.2-201ENST00000428249 105 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC005840.1-201ENST00000498412 377 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 HMGB3P3-201ENST00000510526 400 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC091826.1-201ENST00000514065 313 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 RNA5SP367-201ENST00000516557 118 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 NDUFB9P3-201ENST00000521269 501 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC136628.3-201ENST00000521868 290 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 AC008873.1-201ENST00000625051 138 ntBASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SIT1Q9Y3P8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AC017071.1-201ENST00000564407 2204 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RNU1-70P-201ENST00000362618 164 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.75-201ENST00000362927 97 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 U3.8-201ENST00000363675 217 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 SNORD115-30-201ENST00000364117 82 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 Y_RNA.291-201ENST00000364886 113 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 SNORD15B-201ENST00000384714 146 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RNA5SP252-201ENST00000391131 119 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RNU6-1077P-201ENST00000410506 102 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RNU5E-9P-201ENST00000411164 104 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 BMS1P22-201ENST00000414726 313 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AC025445.1-201ENST00000502728 300 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RNA5SP154-201ENST00000516193 111 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 MIR4435-1-201ENST00000582552 80 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 MIR5006-201ENST00000583027 110 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AP001485.1-201ENST00000604799 199 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AC004832.4-201ENST00000608952 331 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AC104465.1-201ENST00000611365 139 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 MTND1P7-201ENST00000632801 297 ntBASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SIT1Q9Y3P8 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
SIT1Q9Y3P8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.8-201ENST00000362353 102 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.23-201ENST00000362496 106 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.238-201ENST00000364441 102 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 Y_RNA.272-201ENST00000364696 102 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 RNU4-17P-201ENST00000365598 141 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 SNORA18.2-201ENST00000383865 132 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 MIR93-201ENST00000385024 80 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 RNU6-710P-201ENST00000410424 105 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 SNRPGP3-201ENST00000469405 227 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 RNU6-346P-201ENST00000516288 111 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 RNU2-44P-201ENST00000516795 194 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 AC100767.1-201ENST00000528178 123 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 AC022149.2-201ENST00000621061 203 ntBASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIT1Q9Y3P8 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 RNA5SP295-201ENST00000362655 121 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 RNU6-801P-201ENST00000364087 105 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 SNORD74.4-201ENST00000364129 80 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 RNU6-763P-201ENST00000390865 106 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 AL031003.1-201ENST00000404229 172 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 RNA5SP39-201ENST00000411245 120 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 RNU6-107P-201ENST00000516643 102 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 MIR4644-201ENST00000579929 84 ntBASIC3.2□□□□□ -1.9
SIT1Q9Y3P8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms