Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SUMO2P18-201ENST00000518873 252 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 CBX3P4-201ENST00000538909 354 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 SUB1P3-201ENST00000564581 315 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AC090517.1-201ENST00000569307 266 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 MIR3122-201ENST00000577243 73 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 SNORA59B-202ENST00000578183 701 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 CPDP1-201ENST00000579660 283 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AC010928.2-201ENST00000588017 287 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AL133215.3-201ENST00000609801 448 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AL138726.1-201ENST00000614873 333 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AC007014.2-201ENST00000615581 479 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AC090617.10-201ENST00000624308 134 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AL359697.1-201ENST00000624879 587 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 SNORA43.4-201ENST00000629559 138 ntBASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.73□□□□□ -2.13
RPH3AQ9Y2J0 MTND5P9-201ENST00000503854 1755 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 AC245060.5-201ENST00000610778 3293 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 RNU1-76P-201ENST00000362903 159 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 SNORD116-11-201ENST00000383882 92 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 U8.10-201ENST00000384260 133 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 Y_RNA.540-201ENST00000384638 111 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 MTCO3P46-201ENST00000425787 232 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 USP9YP28-201ENST00000435142 589 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 MTND1P4-201ENST00000435196 415 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 MTATP6P13-201ENST00000438531 667 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 AC007395.1-201ENST00000451333 677 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 RPL23AP63-201ENST00000498752 471 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 AC021146.2-201ENST00000504736 556 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 MIR3683-201ENST00000580847 82 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 AC092794.1-201ENST00000612734 582 ntBASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.72□□□□□ -2.13
RPH3AQ9Y2J0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 RNA5SP190-201ENST00000365222 118 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 SNORA29-201ENST00000384183 140 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 SNORA36A-201ENST00000384221 132 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 RNU6-784P-201ENST00000384330 106 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 RNU4-62P-201ENST00000410125 130 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 Y_RNA.619-201ENST00000410951 90 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AL513185.2-201ENST00000425543 193 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AC016925.1-201ENST00000458303 298 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 RNU7-187P-201ENST00000458985 68 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AC097473.1-201ENST00000508142 408 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 RNU6-273P-201ENST00000516937 96 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 RNU1-54P-201ENST00000517181 120 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AF235103.2-201ENST00000525753 346 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 MIR3672-201ENST00000584290 82 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 SNORA4-201ENST00000584302 138 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AC124303.1-201ENST00000605703 360 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 MIR3976-201ENST00000606807 139 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 MIR8074-201ENST00000615081 81 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AC006504.8-201ENST00000621046 635 ntBASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPH3AQ9Y2J0 MIR340-201ENST00000362125 95 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 Y_RNA.132-201ENST00000363421 102 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 Y_RNA.151-201ENST00000363566 112 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 Y_RNA.212-201ENST00000364177 102 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 RNU6-95P-201ENST00000384697 107 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 MIR517A-201ENST00000385001 87 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 SNORD13-201ENST00000459299 104 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 RNU6-864P-201ENST00000516256 108 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 SNORA31.17-201ENST00000516953 127 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 AC026470.2-201ENST00000561492 181 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 AC018638.8-201ENST00000588755 281 ntBASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.7□□□□□ -2.14
RPH3AQ9Y2J0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 Y_RNA.224-201ENST00000364308 111 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 Y_RNA.505-201ENST00000384489 102 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 RNU7-66P-201ENST00000459469 62 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 RPS29P25-201ENST00000481709 171 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 AC010409.1-201ENST00000487382 476 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 AC025465.3-201ENST00000510570 311 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 AC107393.1-201ENST00000512403 346 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 RNU6-1198P-201ENST00000516904 67 ntBASIC1.69□□□□□ -2.14
RPH3AQ9Y2J0 MTND4LP26-201ENST00000518144 282 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms