Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC010531.2-201ENST00000465012 153 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC087477.1-201ENST00000465747 340 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 TCL6_2.1-201ENST00000615162 119 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC137590.2-201ENST00000619709 240 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC006504.8-201ENST00000621046 635 ntBASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.35□□□□□ -2.19
TRAPPC4Q9Y296 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 RNU6-1026P-201ENST00000384465 108 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 MIR300-201ENST00000401138 83 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 MIR1277-201ENST00000408536 78 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC004866.1-201ENST00000411748 78 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AL353572.1-201ENST00000442490 417 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 Y_RNA.675-201ENST00000516389 149 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 SNORA31.24-201ENST00000517232 57 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 SUB1P4-201ENST00000566062 339 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 POLR3GP2-201ENST00000588366 668 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC010900.2-201ENST00000604508 210 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AL359697.1-201ENST00000624879 587 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC100810.6-201ENST00000638068 285 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 AC073869.6-201ENST00000640656 341 ntBASIC1.34□□□□□ -2.19
TRAPPC4Q9Y296 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
TRAPPC4Q9Y296 BX322639.1-202ENST00000423987 2213 ntBASIC1.34□□□□□ -2.2
TRAPPC4Q9Y296 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-545P-201ENST00000362681 104 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 SNORD115-8-201ENST00000363856 82 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 SNORD115-32-201ENST00000364079 82 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 SNORD115-38-201ENST00000365037 82 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 MIR1283-1-201ENST00000408494 87 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC004386.2-201ENST00000441858 148 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC009237.7-201ENST00000447357 229 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 MTND1P17-201ENST00000448961 204 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC067942.3-201ENST00000512025 362 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-718P-201ENST00000516166 105 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-856P-201ENST00000516959 98 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC124303.1-201ENST00000605703 360 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 AC019193.3-201ENST00000609144 554 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 MIR6715A-201ENST00000615929 79 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 MTND4P5-201ENST00000435821 1374 ntBASIC1.33□□□□□ -2.2
TRAPPC4Q9Y296 WWP1P1-201ENST00000466609 2769 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 RNU1-62P-201ENST00000362599 164 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 RNU4-9P-201ENST00000364951 139 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 EIF1P1-201ENST00000421436 341 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 MTND1P4-201ENST00000435196 415 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 MTCO3P8-201ENST00000453691 755 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 RPS29P23-201ENST00000458635 123 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AC092989.1-201ENST00000481235 277 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 ACA59.1-201ENST00000515966 143 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 RNU2-34P-201ENST00000516534 121 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-1088P-201ENST00000516850 104 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 SNORA44.1-201ENST00000517031 108 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AL160236.1-201ENST00000556317 195 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 MIR5006-201ENST00000583027 110 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AP000907.4-201ENST00000604143 237 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AC016925.2-201ENST00000605108 242 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AC002553.4-201ENST00000616896 331 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 AL353997.5-201ENST00000618886 171 ntBASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAPPC4Q9Y296 Y_RNA.301-201ENST00000364990 103 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-596P-201ENST00000365395 98 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-1013P-201ENST00000384180 107 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 MIR487A-201ENST00000385009 80 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 MIR1323-201ENST00000408090 73 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-955P-201ENST00000410497 104 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms