Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 RNU6-922P-201ENST00000516753 99 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 SNORA18.6-201ENST00000516792 115 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 RNU6-445P-201ENST00000516949 107 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AL137161.1-201ENST00000532231 390 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AL391840.1-201ENST00000571144 367 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 MIR3941-201ENST00000582572 103 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC245014.2-201ENST00000603689 287 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC136443.5-201ENST00000603741 370 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC025449.1-201ENST00000603896 529 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AP000907.4-201ENST00000604143 237 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC246785.4-201ENST00000605374 287 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC106754.2-201ENST00000623006 233 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 AC009161.2-201ENST00000624626 138 ntBASIC0.54□□□□□ -2.32
HHLA3Q9XRX5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 MIR96-201ENST00000362288 78 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-227P-201ENST00000362865 103 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 Y_RNA.124-201ENST00000363339 93 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-1305P-201ENST00000364353 104 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 SNORA67.2-201ENST00000384300 149 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-950P-201ENST00000384651 107 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 MIR586-201ENST00000385035 97 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-903P-201ENST00000391270 109 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 MIR1253-201ENST00000408273 105 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-248P-201ENST00000410720 107 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RPS26P42-201ENST00000413485 326 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AC063976.4-201ENST00000421971 163 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AL606490.4-201ENST00000423117 127 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AC004941.2-201ENST00000427009 228 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AC005002.2-201ENST00000438228 269 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 SNRPFP3-201ENST00000457792 225 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU7-125P-201ENST00000458760 62 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU7-57P-201ENST00000459540 60 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 SNORA31.4-201ENST00000516049 129 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-197P-201ENST00000516680 100 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 RNU6-759P-201ENST00000516740 103 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AP002963.1-201ENST00000530590 184 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AC068790.2-201ENST00000602601 557 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AC108706.1-201ENST00000611053 297 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 MIR8054-201ENST00000620877 86 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 MIR6835-201ENST00000621552 64 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AC139792.3-201ENST00000623525 224 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 AL359697.1-201ENST00000624879 587 ntBASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HHLA3Q9XRX5 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.33
HHLA3Q9XRX5 AC018630.2-201ENST00000534866 2403 ntBASIC0.53□□□□□ -2.33
HHLA3Q9XRX5 MIR373-201ENST00000362273 69 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 Y_RNA.164-201ENST00000363709 102 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 RNU1-93P-201ENST00000364704 169 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 MIR1276-201ENST00000408707 83 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 RNA5SP494-201ENST00000410653 129 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC133104.1-201ENST00000429100 218 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 MTND3P9-201ENST00000429526 346 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC022364.2-201ENST00000457963 554 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 RNU7-138P-201ENST00000459479 64 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 SNORD42A-201ENST00000459584 64 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 PDCD5P2-201ENST00000507570 312 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 PSMC1P5-201ENST00000512850 177 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC025465.4-201ENST00000513422 638 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC010493.1-201ENST00000513479 292 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 SNORD79.1-201ENST00000516069 84 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC025647.1-201ENST00000517879 253 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AL590705.4-201ENST00000532209 134 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 MRPS36P4-201ENST00000534436 298 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC022432.1-201ENST00000595739 310 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC146944.4-201ENST00000602697 718 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AL513534.2-201ENST00000603836 250 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 U2.17-201ENST00000611454 95 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 RMST_3.1-201ENST00000611651 109 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 AC079248.2-201ENST00000623779 326 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 OR4G1P-203ENST00000641984 1631 ntBASIC0.52□□□□□ -2.33
HHLA3Q9XRX5 Y_RNA.4-201ENST00000362333 112 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 RNU4-21P-201ENST00000362802 126 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 RNU6-553P-201ENST00000364047 96 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 SNORD114-24-201ENST00000365029 72 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 RNU6-1286P-201ENST00000383871 107 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 RNU6-440P-201ENST00000390882 105 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 AF228730.1-201ENST00000397972 663 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 RN7SKP200-201ENST00000410564 320 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 MTND5P15-201ENST00000434246 349 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 AC245047.7-201ENST00000440265 293 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.51□□□□□ -2.33
HHLA3Q9XRX5 RNU6-1037P-201ENST00000459571 107 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms