Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SNORA33.2-201ENST00000365413 134 ntBASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.364-201ENST00000365532 101 ntBASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 ANP32BP3-201ENST00000559213 706 ntBASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CDK11AQ9UQ88 RNU6-137P-201ENST00000363680 108 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 SNORA3A-201ENST00000364113 130 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 Y_RNA.216-201ENST00000364205 93 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 DEFA7P-201ENST00000382676 285 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 RNU6-639P-201ENST00000384074 107 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 RNU1-148P-201ENST00000384472 162 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 MIR764-201ENST00000390811 85 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 AC009238.1-201ENST00000442165 424 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 AC009237.6-201ENST00000446969 424 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 RNU7-87P-201ENST00000459343 62 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 TOMM22P6-201ENST00000465035 409 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 AC108210.2-201ENST00000503681 201 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 RNU6-475P-201ENST00000516073 104 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 SNORA31.15-201ENST00000516771 132 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 AC005520.5-201ENST00000613926 164 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 AC007485.1-201ENST00000616755 206 ntBASIC3.59□□□□□ -1.83
CDK11AQ9UQ88 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
CDK11AQ9UQ88 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
CDK11AQ9UQ88 AC007336.1-201ENST00000576365 3828 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.132-201ENST00000363421 102 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 MIR29B2-201ENST00000385055 81 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 MIR208B-201ENST00000401172 77 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 snoU13.6-201ENST00000458785 104 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 RNA5SP54-201ENST00000516951 92 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 MIR2355-201ENST00000517199 87 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 AL606534.2-204ENST00000635008 178 ntBASIC3.58□□□□□ -1.84
CDK11AQ9UQ88 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.148-201ENST00000363557 117 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 MIR628-201ENST00000385229 95 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 RNU6-482P-201ENST00000391068 107 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 AC114482.1-201ENST00000418010 247 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 AC018634.1-201ENST00000437554 401 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 RNU6-911P-201ENST00000516523 104 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 AC022432.1-201ENST00000595739 310 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 AC040896.1-201ENST00000613819 479 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 MIR203B-201ENST00000636080 86 ntBASIC3.57□□□□□ -1.84
CDK11AQ9UQ88 AC005592.1-201ENST00000566527 1640 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 Z82195.2-201ENST00000612348 18351 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.80-201ENST00000362996 102 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.106-201ENST00000363189 100 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 RNU5F-3P-201ENST00000363767 117 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 RNU4-42P-201ENST00000364738 142 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.319-201ENST00000365138 92 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 MRPL42P3-201ENST00000401492 326 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 MIR320B2-201ENST00000408479 138 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 RNU7-169P-201ENST00000459456 61 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 SCARNA15.1-201ENST00000516384 125 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 VN1R91P-201ENST00000594377 169 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 AC087588.2-201ENST00000617667 426 ntBASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CDK11AQ9UQ88 snoU2_19.1-201ENST00000362361 80 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 RNU4-15P-201ENST00000362613 141 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 U3.9-201ENST00000363823 204 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 U8.10-201ENST00000384260 133 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 MIR561-201ENST00000385216 97 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 RNU6-1093P-201ENST00000391194 107 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 RNA5SP181-201ENST00000410246 98 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 Y_RNA.592-201ENST00000410274 109 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 RNA5SP270-201ENST00000411361 118 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 MTCO3P19-201ENST00000415864 321 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 USP9YP16-201ENST00000430287 407 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 USP9YP23-201ENST00000455085 407 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 SNORA40.14-201ENST00000516543 86 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 RNU4-77P-201ENST00000516692 156 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 HSBP1P1-201ENST00000555205 166 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 AC090617.3-201ENST00000573670 475 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 U2.1-201ENST00000618978 145 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 AC090517.3-201ENST00000625170 141 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 MIR4272-201ENST00000635924 64 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CDK11AQ9UQ88 SNORD115-8-201ENST00000363856 82 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 SNORD115-38-201ENST00000365037 82 ntBASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
CDK11AQ9UQ88 RNA5SP201-201ENST00000410316 124 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms