Protein–RNA interactions for Protein: Q9ULD4

BRPF3, Bromodomain and PHD finger-containing protein 3, humanhuman

Predictions only

Length 1,205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3Q9ULD4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BRPF3Q9ULD4 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RNA5SP119-201ENST00000362715 117 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RNU6-923P-201ENST00000364753 107 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RNU6-1248P-201ENST00000391096 64 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RNU6-493P-201ENST00000391321 108 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 U3.40-201ENST00000408706 208 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 AC024067.1-201ENST00000426199 223 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RPS29P26-201ENST00000477483 171 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RNA5SP76-201ENST00000516277 87 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 RNY3P16-201ENST00000516338 101 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 MIR1254-2-201ENST00000579553 63 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 MIR4765-201ENST00000585007 77 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 U3.45-201ENST00000607547 219 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
BRPF3Q9ULD4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 RNU6-774P-201ENST00000363238 107 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 RNU6-324P-201ENST00000363957 106 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 SNORD56.5-201ENST00000364281 72 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 MIR627-201ENST00000384979 97 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 RNU6-918P-201ENST00000391219 106 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 AC074198.2-201ENST00000508153 258 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 RNU6-436P-201ENST00000516171 114 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 SCARNA11.3-201ENST00000517276 130 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 AP005660.1-201ENST00000522972 293 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 MIR3616-201ENST00000584070 92 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 RPL30P11-203ENST00000598995 310 ntBASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
BRPF3Q9ULD4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RNU1-70P-201ENST00000362618 164 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 Y_RNA.308-201ENST00000365043 101 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RNU6-211P-201ENST00000384047 107 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RNU6-746P-201ENST00000384112 109 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 MIR183-201ENST00000384958 110 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RPL27AP5-201ENST00000469428 449 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 FCF1P8-201ENST00000510322 597 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 MRPS36P2-201ENST00000512569 299 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RNU6-255P-201ENST00000516957 105 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RNU6-1212P-201ENST00000517023 104 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 AC103810.1-201ENST00000579873 453 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 MIR6733-201ENST00000635723 61 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 U6.105-201ENST00000637379 88 ntBASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.93□□□□□ -1.78
BRPF3Q9ULD4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 RNU6-1272P-201ENST00000362776 107 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 Y_RNA.233-201ENST00000364407 101 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 Y_RNA.262-201ENST00000364641 102 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 Y_RNA.304-201ENST00000365011 112 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 SNORA67.2-201ENST00000384300 149 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 MIR449B-201ENST00000384995 97 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 MIR181B1-201ENST00000385240 110 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 AL139281.1-201ENST00000422120 335 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 TOMM22P2-201ENST00000430735 237 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 RNA5SP112-201ENST00000515937 99 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 AC107934.2-201ENST00000518653 310 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 RPL17P51-201ENST00000605218 238 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 AL449363.1-201ENST00000617815 186 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 AL365265.1-201ENST00000621045 234 ntBASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.92□□□□□ -1.78
BRPF3Q9ULD4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 RNU1-33P-201ENST00000364249 162 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 FO393413.1-201ENST00000402892 195 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 SNORA11-201ENST00000408789 128 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 OOSP1P1-201ENST00000423265 274 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 BTF3P11-201ENST00000426582 477 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 Y_RNA.662-201ENST00000516028 97 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 AC073476.4-201ENST00000628409 72 ntBASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.91□□□□□ -1.78
BRPF3Q9ULD4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.9□□□□□ -1.78
BRPF3Q9ULD4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
BRPF3Q9ULD4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
BRPF3Q9ULD4 U3.8-201ENST00000363675 217 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 RNA5SP50-201ENST00000363731 107 ntBASIC3.9□□□□□ -1.79
BRPF3Q9ULD4 SNORD32B-201ENST00000364460 84 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms