Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AC027119.1-201ENST00000440877 241 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AC004386.2-201ENST00000441858 148 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 OR2AQ1P-201ENST00000451972 200 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 RNU6-1038P-201ENST00000516516 104 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AC104383.1-201ENST00000530297 370 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AL118558.2-201ENST00000556294 238 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 MIR5006-201ENST00000583027 110 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 MIR4781-201ENST00000585250 76 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 AL357078.3-201ENST00000607528 618 ntBASIC1.3□□□□□ -2.2
CDH9Q9ULB4 MIR337-201ENST00000362281 93 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU4-75P-201ENST00000364621 146 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU4-20P-201ENST00000365601 151 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 Y_RNA.409-201ENST00000383990 98 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 CALM2P3-201ENST00000400429 449 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU4-55P-201ENST00000410731 137 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 MTATP6P26-201ENST00000445926 662 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 snoU13.27-201ENST00000459278 104 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU6-498P-201ENST00000459468 107 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNA5SP401-201ENST00000515920 127 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU6-948P-201ENST00000516374 107 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU6-835P-201ENST00000516974 104 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 MIR5692C1-201ENST00000585309 91 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 NBR2-204ENST00000587322 63 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 AC048344.4-201ENST00000619744 527 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 FER-210ENST00000628534 558 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 MIR338-201ENST00000636369 67 ntBASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CDH9Q9ULB4 RNU4-66P-201ENST00000365199 138 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 Y_RNA.378-201ENST00000365652 113 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 RNU6-259P-201ENST00000383999 107 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 RNU6-968P-201ENST00000384076 107 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 RNU6-38P-201ENST00000384085 107 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AL663109.1-201ENST00000411498 844 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AL135790.2-201ENST00000437701 267 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC114982.1-201ENST00000469402 321 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC005668.1-201ENST00000571142 476 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC015688.6-201ENST00000577737 104 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 FGF7P1-201ENST00000582820 288 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AP003465.2-201ENST00000602571 373 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AP000907.4-201ENST00000604143 237 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC092954.2-201ENST00000609103 430 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 AC093783.1-201ENST00000612976 329 ntBASIC1.28□□□□□ -2.2
CDH9Q9ULB4 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
CDH9Q9ULB4 MTND5P35-201ENST00000557537 1720 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.123-201ENST00000363338 102 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU4-24P-201ENST00000364565 139 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 SNORA72.2-201ENST00000365028 127 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU6-53P-201ENST00000365367 106 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU6-975P-201ENST00000384296 105 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU6-780P-201ENST00000391030 104 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 MRPL35P1-201ENST00000404272 572 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU6-648P-201ENST00000410190 107 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU2-16P-201ENST00000410712 136 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL359672.1-201ENST00000442302 409 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC009237.7-201ENST00000447357 229 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 NFU1P2-201ENST00000448700 469 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC016717.1-201ENST00000448918 286 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RNU6-261P-201ENST00000459506 102 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC083798.1-201ENST00000472671 131 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.654-201ENST00000497848 106 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC019235.1-201ENST00000503847 207 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 SNORA19.2-201ENST00000516013 114 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 MRPS36P4-201ENST00000534436 298 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL157687.1-201ENST00000554853 619 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 MIR3937-201ENST00000580135 106 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC103591.3-201ENST00000608684 209 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL121757.2-201ENST00000611223 313 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AL078604.3-201ENST00000615580 211 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 AC139792.3-201ENST00000623525 224 ntBASIC1.27□□□□□ -2.21
CDH9Q9ULB4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.194-201ENST00000363985 102 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 MIR194-1-201ENST00000384892 85 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms