Protein–RNA interactions for Protein: Q9NV64

TMEM39A, Transmembrane protein 39A, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39AQ9NV64 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.81
TMEM39AQ9NV64 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.121-201ENST00000363309 113 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.412-201ENST00000384001 104 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 SNORA44-201ENST00000384584 132 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 SNORA12-201ENST00000391162 147 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 AL031121.1-201ENST00000406553 254 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 RN7SKP284-201ENST00000411002 343 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 RPS20P10-201ENST00000451209 253 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 AL031183.1-201ENST00000457667 207 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 AL078604.3-201ENST00000615580 211 ntBASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMEM39AQ9NV64 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.243-201ENST00000364481 109 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.357-201ENST00000365487 109 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 RNU6-81P-201ENST00000365608 104 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 RNU6-449P-201ENST00000383914 107 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 SNORA26.5-201ENST00000391215 123 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 AL135790.2-201ENST00000437701 267 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 SNORA31.1-201ENST00000515993 133 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 SNORA31.5-201ENST00000516190 133 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 AC100767.1-201ENST00000528178 123 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 RPL12P50-201ENST00000603116 116 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 AL033523.1-201ENST00000605153 153 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 AC093732.2-201ENST00000607950 274 ntBASIC3.7□□□□□ -1.82
TMEM39AQ9NV64 AC010329.5-201ENST00000623497 2174 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.23-201ENST00000362496 106 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.75-201ENST00000362927 97 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 U3.8-201ENST00000363675 217 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 SNORA67.2-201ENST00000384300 149 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 RNU6-710P-201ENST00000410424 105 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 MTATP6P29-201ENST00000415057 132 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 AL365496.1-201ENST00000426885 215 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 SEPT7P4-201ENST00000437076 306 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.69□□□□□ -1.82
TMEM39AQ9NV64 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC093010.3-201ENST00000570269 15214 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.287-201ENST00000364853 94 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AL159169.1-201ENST00000421119 127 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 Z98742.2-201ENST00000431564 187 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC107083.1-201ENST00000439643 279 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC146507.2-201ENST00000460608 476 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 MIR4672-201ENST00000583126 81 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AL670379.2-201ENST00000604983 252 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC013791.1-201ENST00000616619 62 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 AC000403.1-201ENST00000613696 3585 ntBASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.68□□□□□ -1.82
TMEM39AQ9NV64 RNA5SP126-201ENST00000365092 109 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.343-201ENST00000365354 112 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 RNU6-1077P-201ENST00000410506 102 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 AC005840.1-201ENST00000498412 377 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.797-201ENST00000515977 94 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 RNU6-1231P-201ENST00000517185 103 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 AC021269.2-201ENST00000532318 330 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 U6.115-201ENST00000636045 103 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 AL035425.3-201ENST00000564206 4996 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 AC134026.1-201ENST00000623249 2239 ntBASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
TMEM39AQ9NV64 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RNU1-18P-201ENST00000363062 164 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RNU6-1048P-201ENST00000364054 107 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RNU4-84P-201ENST00000364200 139 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 RNU6-1305P-201ENST00000364353 104 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 Y_RNA.293-201ENST00000364908 93 ntBASIC3.66□□□□□ -1.82
TMEM39AQ9NV64 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 145 ms