Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 RPL23AP75-201ENST00000491601 451 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AC116337.1-201ENST00000509680 687 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.670-201ENST00000516255 105 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 MIR4287-201ENST00000579398 78 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 CYP2C61P-201ENST00000604072 290 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 AC005034.5-201ENST00000604219 466 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 SCARNA4-201ENST00000629045 128 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 TPTEP1-208ENST00000636884 213 ntBASIC2.32□□□□□ -2.04
SMC4Q9NTJ3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 RNU11-3P-201ENST00000391111 133 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 RNU6-174P-201ENST00000410406 106 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 EIF4EP2-201ENST00000422816 654 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 SNORD5.1-201ENST00000458800 75 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 TOMM22P6-201ENST00000465035 409 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 RPS23P5-201ENST00000495419 428 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.691-201ENST00000516611 103 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 RNU6-1213P-201ENST00000517075 94 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 AC011494.1-201ENST00000596454 237 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 AC018462.2-201ENST00000605375 395 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 U1.36-201ENST00000620684 176 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 AC130454.1-201ENST00000622948 401 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 AL359697.1-201ENST00000624879 587 ntBASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SMC4Q9NTJ3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 RNU6-438P-201ENST00000365561 103 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.474-201ENST00000384341 102 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 U8.13-201ENST00000390842 128 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AL139396.1-201ENST00000421137 167 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 RNU7-14P-201ENST00000459331 62 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 RN7SL274P-201ENST00000492268 272 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AC107393.1-201ENST00000512403 346 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 ACA59.1-201ENST00000515966 143 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 RNU1-54P-201ENST00000517181 120 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 DEFB131C-201ENST00000528817 165 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AC005668.1-201ENST00000571142 476 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 MIR4419B-201ENST00000577260 68 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 MIR3169-201ENST00000578032 83 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 MIR548S-201ENST00000581352 82 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AC016727.1-205ENST00000605437 569 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 AC005562.2-201ENST00000618264 111 ntBASIC2.3□□□□□ -2.04
SMC4Q9NTJ3 ZNF72P-201ENST00000425869 1908 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AL356292.1-201ENST00000283110 373 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 RNU6-23P-201ENST00000363283 107 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.404-201ENST00000383978 102 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 SNORA8-201ENST00000384574 139 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 SNORA26.9-201ENST00000391322 122 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 Y_RNA.594-201ENST00000410373 140 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 MTND3P10-201ENST00000450967 341 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AC107399.1-201ENST00000451226 265 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AC087477.1-201ENST00000465747 340 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 RPL7P42-201ENST00000481005 679 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 MIR5696-201ENST00000578474 85 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AL627230.6-201ENST00000611129 280 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 MIR6845-201ENST00000613182 61 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 AC092794.2-201ENST00000620933 563 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.29□□□□□ -2.04
SMC4Q9NTJ3 SNORD115-32-201ENST00000364079 82 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNA5SP493-201ENST00000364115 91 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNU6-596P-201ENST00000365395 98 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNU6-1026P-201ENST00000384465 108 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNU6-331P-201ENST00000384724 107 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 MIR597-201ENST00000384968 97 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RPL37P10-201ENST00000412884 288 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AL358453.1-201ENST00000422522 250 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 HMGN2P19-201ENST00000425149 265 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AC092473.1-201ENST00000441098 221 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AC007395.1-201ENST00000451333 677 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNU6-875P-201ENST00000516488 106 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNA5SP384-201ENST00000516615 116 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 RNU6-295P-201ENST00000516901 104 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AC105029.1-201ENST00000520250 669 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 CBX3P8-201ENST00000532412 525 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AP001094.1-201ENST00000579805 193 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 UBE2V2P2-201ENST00000587677 504 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AL096840.1-201ENST00000603287 93 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AC009229.3-201ENST00000608056 282 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 uc_338.5-201ENST00000611839 155 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 AL773524.1-201ENST00000614065 229 ntBASIC2.28□□□□□ -2.04
SMC4Q9NTJ3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 175.3 ms