Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 AC245047.3-201ENST00000429428 127 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 MTATP6P9-201ENST00000515039 680 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 DEFB108E-201ENST00000524692 240 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 AC011604.1-201ENST00000545978 196 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 MIR4778-201ENST00000577635 80 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 AL513534.2-201ENST00000603836 250 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 uc_338.11-201ENST00000619132 160 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 MIR8054-201ENST00000620877 86 ntBASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
UBQLN4Q9NRR5 MTND4P4-201ENST00000439033 1366 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 RNU4-76P-201ENST00000364509 141 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 RNU4-12P-201ENST00000365233 139 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AL355796.1-201ENST00000406706 323 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-1186P-201ENST00000410429 97 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AC245047.7-201ENST00000440265 293 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AC009237.7-201ENST00000447357 229 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 HMGB1P29-201ENST00000505659 499 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AC105417.1-201ENST00000514691 285 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 SNORD79.1-201ENST00000516069 84 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-612P-201ENST00000516909 102 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AL590705.4-201ENST00000532209 134 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AC022217.4-201ENST00000604389 163 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 GHRLOS.1-201ENST00000610995 70 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 U2.17-201ENST00000611454 95 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AL359075.3-201ENST00000613288 217 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 AC022306.3-201ENST00000619930 550 ntBASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
UBQLN4Q9NRR5 RNA5SP361-201ENST00000362686 118 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 Y_RNA.560-201ENST00000384689 102 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 MIR200A-201ENST00000384875 90 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-440P-201ENST00000390882 105 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 SNORD12-201ENST00000391002 90 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AC004866.1-201ENST00000411748 78 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 RPS26P5-201ENST00000418544 335 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 MTND3P9-201ENST00000429526 346 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 MTND2P14-201ENST00000482139 351 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 RNU1-117P-201ENST00000517041 158 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AC022432.1-201ENST00000595739 310 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AC087683.2-201ENST00000611384 326 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 MIR6788-201ENST00000618842 66 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 AL078596.1-201ENST00000624856 447 ntBASIC0.56□□□□□ -2.32
UBQLN4Q9NRR5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 Y_RNA.363-201ENST00000365529 113 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 SNORA40.3-201ENST00000390964 122 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AL034345.1-201ENST00000407768 123 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 MIR548J-201ENST00000408833 112 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 RNU2-9P-201ENST00000410194 145 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-1054P-201ENST00000411293 104 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 CDK8P2-201ENST00000415020 547 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 MTND3P17-201ENST00000416968 344 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AC009961.2-201ENST00000435771 251 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 MTCO2P3-201ENST00000442543 421 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 SRRM1P2-201ENST00000464531 1192 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AC010493.1-201ENST00000513479 292 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AC080078.2-201ENST00000603766 501 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AC004223.4-201ENST00000612426 332 ntBASIC0.55□□□□□ -2.32
UBQLN4Q9NRR5 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-227P-201ENST00000362865 103 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AF228730.1-201ENST00000397972 663 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-733P-201ENST00000410759 104 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AC016909.1-201ENST00000415916 166 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 RNU7-167P-201ENST00000459160 62 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-322P-201ENST00000516010 103 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AP003072.2-201ENST00000527756 676 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 MIR5583-1-201ENST00000580941 59 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 AL390123.1-201ENST00000603216 237 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 snoZ196.1-201ENST00000625269 89 ntBASIC0.54□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-1240P-201ENST00000365155 104 ntBASIC0.53□□□□□ -2.32
UBQLN4Q9NRR5 RNU6-282P-201ENST00000365357 103 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms