Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 NFU1P2-201ENST00000448700 469 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 MTCO3P8-201ENST00000453691 755 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 RNU7-138P-201ENST00000459479 64 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 SUMO2P16-201ENST00000519475 264 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 AC016256.1-201ENST00000547971 354 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 AC021506.2-201ENST00000612354 169 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 TCL6_2.1-201ENST00000615162 119 ntBASIC0.83□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-517P-201ENST00000384362 110 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 RPS26P42-201ENST00000413485 326 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC016909.1-201ENST00000415916 166 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC010154.1-201ENST00000425857 269 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 MTND3P9-201ENST00000429526 346 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC009237.7-201ENST00000447357 229 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 SNORA31.10-201ENST00000516482 106 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC026470.2-201ENST00000561492 181 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC068790.2-201ENST00000602601 557 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC008536.2-201ENST00000607284 349 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC064836.2-201ENST00000609491 462 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 HULC.1-201ENST00000612720 240 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AC139792.3-201ENST00000623525 224 ntBASIC0.82□□□□□ -2.28
SDHAF3Q9NRP4 AL390237.1-201ENST00000404226 1415 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 HSBP1P2-201ENST00000299671 229 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1120P-201ENST00000362988 108 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 SNORD114-27-201ENST00000363766 70 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 SNORA72.3-201ENST00000365074 132 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 MTATP6P18-201ENST00000417994 673 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 TIMM9P3-201ENST00000428659 274 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 MTND4P32-201ENST00000437189 1237 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 AL445567.1-201ENST00000439121 144 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 AC025465.4-201ENST00000513422 638 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 MRPS36P4-201ENST00000534436 298 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 RMST_3.1-201ENST00000611651 109 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 U6.108-201ENST00000637764 58 ntBASIC0.81□□□□□ -2.28
SDHAF3Q9NRP4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 SNORA25.9-201ENST00000365087 128 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 MIR515-2-201ENST00000384883 83 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 MIR515-1-201ENST00000384884 83 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 RNA5SP219-201ENST00000390940 113 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 RNU11-5P-201ENST00000391216 129 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 MIR1276-201ENST00000408707 83 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 RNA5SP494-201ENST00000410653 129 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 AC073415.1-201ENST00000449240 153 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1037P-201ENST00000459571 107 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 SNORA14.1-201ENST00000516113 141 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 RN7SKP287-201ENST00000516546 266 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 AP000907.4-201ENST00000604143 237 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 AC093424.1-201ENST00000604999 338 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 MIR8070-201ENST00000616510 88 ntBASIC0.8□□□□□ -2.28
SDHAF3Q9NRP4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1305P-201ENST00000364353 104 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1286P-201ENST00000383871 107 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 SNORA67.2-201ENST00000384300 149 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1031P-201ENST00000384773 107 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 MIR586-201ENST00000385035 97 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 SNORA12.1-201ENST00000390873 148 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-57P-201ENST00000411348 103 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RPS4XP11-201ENST00000446897 772 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RPL39P38-201ENST00000467018 153 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AF186996.7-201ENST00000492781 209 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 TRBVA-201ENST00000498804 316 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 PSMC1P5-201ENST00000512850 177 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1146P-201ENST00000516282 102 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-430P-201ENST00000517078 107 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 MTND1P24-201ENST00000552175 861 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 MIR5695-201ENST00000579717 85 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AL390123.1-201ENST00000603216 237 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AC136443.5-201ENST00000603741 370 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AC022217.4-201ENST00000604389 163 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 AC097065.2-201ENST00000608159 533 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 uc_338.34-201ENST00000617467 174 ntBASIC0.79□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1317P-201ENST00000364582 104 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 RNU5A-2P-201ENST00000384337 116 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 RNU6-1106P-201ENST00000390845 107 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC092991.1-201ENST00000477176 376 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 208.4 ms