Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-1093P-201ENST00000391194 107 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AL079342.1-201ENST00000401460 267 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX2Q9NPC8 DPH3P2-201ENST00000422618 250 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AP000870.1-201ENST00000472927 406 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 SNORA25.10-201ENST00000515926 124 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 RNU6-58P-201ENST00000517143 103 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AC023442.1-201ENST00000531247 422 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 EIF4A1P12-201ENST00000551910 141 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AC090617.3-201ENST00000573670 475 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AC016925.2-201ENST00000605108 242 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 SNORD58B-201ENST00000607313 66 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX2Q9NPC8 AL606534.2-204ENST00000635008 178 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 MTND5P16-201ENST00000460269 1703 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SIX2Q9NPC8 ZNF355P-201ENST00000427301 3216 ntBASIC2.1□□□□□ -2.07
SIX2Q9NPC8 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC092881.1-201ENST00000638218 2733 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 U3.9-201ENST00000363823 204 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 SNORD32B-201ENST00000364460 84 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.358-201ENST00000365491 99 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 RNU6-541P-201ENST00000384709 110 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 SNORA12-201ENST00000391162 147 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 RNU1-139P-201ENST00000391307 165 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AL590004.1-201ENST00000405321 300 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.592-201ENST00000410274 109 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 Y_RNA.605-201ENST00000410577 105 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AL590556.1-201ENST00000423231 483 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC096644.2-201ENST00000429278 159 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 USP9YP16-201ENST00000430287 407 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AL445687.1-201ENST00000439946 251 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 USP9YP23-201ENST00000455085 407 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 U8.22-201ENST00000459141 133 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 RNU7-87P-201ENST00000459343 62 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 RNU7-169P-201ENST00000459456 61 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC007215.1-201ENST00000464893 276 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 RNU6-1114P-201ENST00000516022 107 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC091544.4-201ENST00000555268 342 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 MIR3935-201ENST00000583472 104 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC016727.2-201ENST00000603988 621 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AL138963.2-201ENST00000605137 226 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AC040896.1-201ENST00000613819 479 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 MIR5739-201ENST00000619803 80 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.09□□□□□ -2.07
SIX2Q9NPC8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.09□□□□□ -2.07
SIX2Q9NPC8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SIX2Q9NPC8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.09□□□□□ -2.08
SIX2Q9NPC8 MTND4P1-201ENST00000457501 1466 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNU6-944P-201ENST00000364023 107 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.557-201ENST00000384680 107 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 MIR10B-201ENST00000385011 110 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 MIR95-201ENST00000385072 81 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNA5SP213-201ENST00000391031 106 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNU6-159P-201ENST00000391080 106 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.597-201ENST00000410463 100 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 AC003685.2-201ENST00000422795 395 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 AL160004.2-201ENST00000432935 350 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNU6-475P-201ENST00000516073 104 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 SCARNA15.1-201ENST00000516384 125 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNU6-911P-201ENST00000516523 104 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNU6-1198P-201ENST00000516904 67 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNA5SP54-201ENST00000516951 92 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 RNU6-586P-201ENST00000517265 104 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 IGLV3-17-201ENST00000519099 244 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 GNAI2P1-201ENST00000541815 315 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 MYL12BP1-201ENST00000569826 507 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 VN1R91P-201ENST00000594377 169 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 AL138825.1-201ENST00000618587 192 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 U2.1-201ENST00000618978 145 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.08□□□□□ -2.08
SIX2Q9NPC8 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
SIX2Q9NPC8 BX322639.1-202ENST00000423987 2213 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC005592.1-201ENST00000566527 1640 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.80-201ENST00000362996 102 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 RNU6-1180P-201ENST00000364935 107 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 AC117470.1-201ENST00000381974 330 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.485-201ENST00000384395 102 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 MIR549A-201ENST00000385268 96 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SIX2Q9NPC8 MRPL42P3-201ENST00000401492 326 ntBASIC2.07□□□□□ -2.08
SIX2Q9NPC8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms