Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SNORA70.14-201ENST00000516205 110 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 RNU7-115P-201ENST00000516433 55 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.46□□□□□ -1.86
SSU72Q9NP77 MIR4724-201ENST00000579485 89 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.46□□□□□ -1.86
SSU72Q9NP77 AL606490.9-201ENST00000603331 271 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 uc_338.14-201ENST00000613162 166 ntBASIC3.46□□□□□ -1.86
SSU72Q9NP77 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
SSU72Q9NP77 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.45□□□□□ -1.86
SSU72Q9NP77 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.45□□□□□ -1.86
SSU72Q9NP77 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
SSU72Q9NP77 RNU6-460P-201ENST00000391158 108 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 AL035461.1-201ENST00000421490 332 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 AL162151.2-201ENST00000448875 158 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 RPL23AP7-203ENST00000449021 469 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 SNORA70.12-201ENST00000516084 153 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 SNORA31.21-201ENST00000517180 77 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 TOMM20P2-201ENST00000540082 421 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 AL359881.1-201ENST00000602916 267 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 AC107294.3-201ENST00000609211 526 ntBASIC3.45□□□□□ -1.86
SSU72Q9NP77 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
SSU72Q9NP77 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSU72Q9NP77 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNU6-199P-201ENST00000362954 107 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 MIR539-201ENST00000365690 78 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNU6-80P-201ENST00000384195 107 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNA5SP317-201ENST00000410176 116 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNA5SP311-201ENST00000411290 116 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 AL121890.1-201ENST00000435457 205 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNA5SP315-201ENST00000516340 116 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNU6-1337P-201ENST00000516525 95 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 Y_RNA.686-201ENST00000516548 134 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 RNA5SP312-201ENST00000517068 116 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 MIR4284-201ENST00000578924 81 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 AC008745.1-201ENST00000604064 271 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 MIR548AY-201ENST00000617669 107 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 AL354798.1-201ENST00000622505 329 ntBASIC3.44□□□□□ -1.86
SSU72Q9NP77 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
SSU72Q9NP77 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SSU72Q9NP77 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SSU72Q9NP77 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSU72Q9NP77 AL136164.4-201ENST00000625013 2135 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 Y_RNA.251-201ENST00000364551 99 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 SNORA20B-201ENST00000384220 132 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 SNORA70C-201ENST00000384538 135 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 SNORA36B-201ENST00000410438 131 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 Z98742.2-201ENST00000431564 187 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 RNU6-659P-201ENST00000516454 104 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 RPL17P51-201ENST00000605218 238 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 MIR6716-201ENST00000613413 80 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.43□□□□□ -1.86
SSU72Q9NP77 AC068647.2-201ENST00000637380 353 ntBASIC3.43□□□□□ -1.86
SSU72Q9NP77 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSU72Q9NP77 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SSU72Q9NP77 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR148B-201ENST00000362252 99 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR30B-201ENST00000384850 88 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR873-201ENST00000401120 77 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 RNU4-43P-201ENST00000410628 137 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC097463.2-201ENST00000421074 142 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.42□□□□□ -1.86
SSU72Q9NP77 HSPE1P21-201ENST00000438283 308 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 HSPE1P13-201ENST00000451143 297 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 RN7SL459P-201ENST00000481078 302 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC026402.1-201ENST00000513642 170 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR449C-201ENST00000516047 92 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 RNU6-919P-201ENST00000516731 104 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 RNA5SP380-201ENST00000517190 98 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC245166.1-201ENST00000521012 253 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC093331.1-201ENST00000521474 169 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR3646-201ENST00000578301 84 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AP003357.1-201ENST00000604497 148 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AC093732.2-201ENST00000607950 274 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR6748-201ENST00000610433 71 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 MIR6798-201ENST00000612887 67 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 TUG1_4.1-201ENST00000619464 181 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SSU72Q9NP77 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 AP001340.1-201ENST00000624405 217 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSU72Q9NP77 AL355596.1-201ENST00000565399 3996 ntBASIC3.42□□□□□ -1.86
SSU72Q9NP77 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.42□□□□□ -1.86
SSU72Q9NP77 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSU72Q9NP77 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSU72Q9NP77 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SSU72Q9NP77 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSU72Q9NP77 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SSU72Q9NP77 RNU1-32P-201ENST00000363937 159 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 RNU6-1325P-201ENST00000364905 105 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 SNORD37.2-201ENST00000391075 66 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 RNU6-588P-201ENST00000410281 105 ntBASIC3.41□□□□□ -1.86
SSU72Q9NP77 RN7SKP111-201ENST00000410349 271 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms