Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 MIR424-201ENST00000362227 98 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.100-201ENST00000363141 102 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 RNU4-13P-201ENST00000364019 141 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 RNU6-933P-201ENST00000384424 107 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 RNU6-790P-201ENST00000384479 105 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
HMG20AQ9NP66 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.2□□□□□ -2.22
HMG20AQ9NP66 SNRPEP10-201ENST00000420249 274 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 NCOR1P3-201ENST00000420479 303 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
HMG20AQ9NP66 AC079354.2-201ENST00000453523 154 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.2□□□□□ -2.22
HMG20AQ9NP66 snoU13.30-201ENST00000458951 104 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 MTCYBP18-201ENST00000501056 747 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 YWHAEP4-201ENST00000505390 198 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 RNU6-256P-201ENST00000516747 97 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 AC109635.3-201ENST00000529536 185 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 AC016256.1-201ENST00000547971 354 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 RRN3P3-201ENST00000549207 578 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 SUB1P3-201ENST00000564581 315 ntBASIC1.2□□□□□ -2.22
HMG20AQ9NP66 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.2□□□□□ -2.22
HMG20AQ9NP66 SNORA33-201ENST00000363664 130 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.212-201ENST00000364177 102 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 U8.10-201ENST00000384260 133 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 RNU6-306P-201ENST00000384617 107 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 MIR548B-201ENST00000385247 97 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AL117342.1-201ENST00000404861 406 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 SNORA11.2-201ENST00000408318 127 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 MIR1283-1-201ENST00000408494 87 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 MTCO1P21-201ENST00000416634 589 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC245047.4-201ENST00000433189 144 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC007395.1-201ENST00000451333 677 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 OR2AQ1P-201ENST00000451972 200 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.19□□□□□ -2.22
HMG20AQ9NP66 HMGN2P9-201ENST00000476875 229 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 RNU6-720P-201ENST00000516363 108 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 RNA5SP384-201ENST00000516615 116 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 RNU6-548P-201ENST00000517083 115 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 RNA5SP437-201ENST00000517249 129 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 SUMO2P18-201ENST00000518873 252 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AL645939.4-201ENST00000604495 135 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.19□□□□□ -2.22
HMG20AQ9NP66 TCL6_2.1-201ENST00000615162 119 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC126177.8-201ENST00000618339 1015 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 AC005858.4-201ENST00000623191 700 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
HMG20AQ9NP66 ZNF204P-201ENST00000416749 2397 ntBASIC1.19□□□□□ -2.22
HMG20AQ9NP66 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 MIR26B-201ENST00000362251 77 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.132-201ENST00000363421 102 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 RNY4P14-201ENST00000363656 96 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 RNU4-12P-201ENST00000365233 139 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.402-201ENST00000383972 102 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 RNU6-128P-201ENST00000383976 107 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.414-201ENST00000384011 101 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 SNORD116-4-201ENST00000384733 96 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 MIR517A-201ENST00000385001 87 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 RPS26P42-201ENST00000413485 326 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 ATP5J2P3-201ENST00000451550 258 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 PCMTD1P1-201ENST00000455560 355 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 TRBVA-201ENST00000498804 316 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 EIF1P4-201ENST00000572664 335 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 SCARNA4-201ENST00000629045 128 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 AC100810.6-201ENST00000638068 285 ntBASIC1.18□□□□□ -2.22
HMG20AQ9NP66 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.18□□□□□ -2.22
HMG20AQ9NP66 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.17□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.89-201ENST00000363031 102 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU6-623P-201ENST00000363143 105 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.135-201ENST00000363439 95 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU1-96P-201ENST00000364163 162 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU6-1305P-201ENST00000364353 104 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU6-203P-201ENST00000384038 104 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 SNORD26-201ENST00000384147 75 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.450-201ENST00000384198 113 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU6-831P-201ENST00000384548 107 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 Y_RNA.530-201ENST00000384587 101 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 MIR181A1-201ENST00000385026 110 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HMG20AQ9NP66 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
HMG20AQ9NP66 SNORD115-47-201ENST00000391226 86 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU6-174P-201ENST00000410406 106 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.17□□□□□ -2.22
HMG20AQ9NP66 AL353572.1-201ENST00000442490 417 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 MTCO2P30-201ENST00000503662 364 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 AC011406.1-201ENST00000512440 370 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 RNU6-856P-201ENST00000516959 98 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 SNORA44.1-201ENST00000517031 108 ntBASIC1.17□□□□□ -2.22
HMG20AQ9NP66 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.17□□□□□ -2.22
HMG20AQ9NP66 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.17□□□□□ -2.22
HMG20AQ9NP66 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms