Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC002984.1-201ENST00000591692 448 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC008749.1-201ENST00000597650 306 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC067747.1-201ENST00000608026 250 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC084781.2-201ENST00000615568 161 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC006386.2-201ENST00000624491 75 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC022513.1-201ENST00000624512 117 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC012005.1-201ENST00000624575 75 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AL008636.1-201ENST00000625038 1018 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 AC008873.1-201ENST00000625051 138 ntBASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CHMP1AQ9HD42 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU6-727P-201ENST00000363592 107 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU6-280P-201ENST00000364145 104 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU6-867P-201ENST00000364956 107 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU6-975P-201ENST00000384296 105 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 MIR559-201ENST00000385188 96 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AL359511.1-201ENST00000402970 211 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU2-40P-201ENST00000410833 196 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC007098.1-201ENST00000420122 367 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AF228730.4-201ENST00000421457 183 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC016717.1-201ENST00000448918 286 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU7-152P-201ENST00000458982 64 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNU7-87P-201ENST00000459343 62 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC067942.3-201ENST00000512025 362 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC093303.1-201ENST00000514549 295 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AK6P2-201ENST00000549020 471 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC090617.3-201ENST00000573670 475 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC125232.2-201ENST00000592457 143 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 MZT1P2-201ENST00000604387 248 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 SNORD11B-201ENST00000607707 90 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC135507.2-201ENST00000612443 309 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 AC005296.1-201ENST00000616145 209 ntBASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CHMP1AQ9HD42 RNA5SP276-201ENST00000362580 94 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 SNORD87-201ENST00000364849 89 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 RNU5E-4P-201ENST00000364931 120 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 Y_RNA.358-201ENST00000365491 99 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 Y_RNA.577-201ENST00000384794 101 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 MIR17-201ENST00000385012 84 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AL033519.2-201ENST00000403958 392 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 MRPS18CP6-201ENST00000423587 223 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AL357134.1-201ENST00000445848 426 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AC104435.1-201ENST00000483483 166 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 RNU6-264P-201ENST00000517134 104 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 MIR4319-201ENST00000577285 85 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AC087588.2-201ENST00000617667 426 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AL359697.1-201ENST00000624879 587 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 MIR1291-201ENST00000627649 87 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 AC068205.3-201ENST00000636385 468 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 ZNF702P-202ENST00000434269 1966 ntBASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
CHMP1AQ9HD42 MIR208A-201ENST00000362287 71 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNU4-79P-201ENST00000362764 141 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.333-201ENST00000365274 102 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.415-201ENST00000384012 112 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNU6-793P-201ENST00000384233 104 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 MT-TD-201ENST00000387419 68 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNU6-1156P-201ENST00000410365 100 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNU6-1001P-201ENST00000411265 100 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RPS15AP28-201ENST00000435088 386 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 MTND2P29-201ENST00000438595 412 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC010095.1-201ENST00000443543 144 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC105758.1-201ENST00000506038 399 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC008413.1-201ENST00000511864 177 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 RNU6-856P-201ENST00000516959 98 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC093023.1-201ENST00000547375 507 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 AC010999.1-201ENST00000611856 324 ntBASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.96□□□□□ -2.1
CHMP1AQ9HD42 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 Y_RNA.179-201ENST00000363844 90 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 MIR329-1-201ENST00000385028 80 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 MIR548B-201ENST00000385247 97 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP501-201ENST00000410990 112 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 RNA5SP184-201ENST00000411071 108 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 MTCO2P27-201ENST00000420740 428 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 RPL23AP3-201ENST00000453844 468 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 AL049873.1-201ENST00000480540 376 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 LARP7P3-201ENST00000579888 337 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 AC133104.2-201ENST00000615272 193 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 MIR6817-201ENST00000615588 66 ntBASIC1.95□□□□□ -2.1
CHMP1AQ9HD42 AL078596.1-201ENST00000624856 447 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms