Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 MIR1285-1-201ENST00000408593 84 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC016909.1-201ENST00000415916 166 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 RNU1-123P-201ENST00000458950 160 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 MTCYBP18-201ENST00000501056 747 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 RNU6-1038P-201ENST00000516516 104 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 RN7SKP88-201ENST00000516847 250 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC025647.1-201ENST00000517879 253 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 MTND1P35-201ENST00000526739 508 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 OSBPL9P5-201ENST00000542581 171 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 MIR3664-201ENST00000579074 99 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 MIR4513-201ENST00000581077 86 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 MZT1P2-201ENST00000604387 248 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC004492.1-201ENST00000607036 742 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 SNORD11B-201ENST00000607707 90 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 7SK.8-201ENST00000612110 250 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AL359075.3-201ENST00000613288 217 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 7SK.11-201ENST00000615477 250 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 7SK.13-201ENST00000622040 250 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 AC078883.4-201ENST00000623218 367 ntBASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.84□□□□□ -2.27
SND1-IT1Q9HBX3 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.84□□□□□ -2.28
SND1-IT1Q9HBX3 Y_RNA.167-201ENST00000363735 109 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 RNA5SP259-201ENST00000365541 109 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 SNORA69-201ENST00000383895 132 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-128P-201ENST00000383976 107 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 MIR521-1-201ENST00000384902 87 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 RPL21P1-201ENST00000399532 476 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 CALM2P3-201ENST00000400429 449 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 TOMM22P2-201ENST00000430735 237 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 PGBD4P5-201ENST00000445958 426 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 RPS27P1-201ENST00000450552 247 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 NDUFB4P10-201ENST00000452541 359 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 SNORD13-201ENST00000459299 104 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 RPL39P38-201ENST00000467018 153 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AC116337.1-201ENST00000509680 687 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AC092436.3-201ENST00000511788 257 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-142P-201ENST00000516682 145 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AP003033.1-201ENST00000527244 415 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AL133215.3-201ENST00000609801 448 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AC021506.2-201ENST00000612354 169 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 FAM157A-202ENST00000615155 405 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 AC073534.2-201ENST00000620377 381 ntBASIC0.83□□□□□ -2.28
SND1-IT1Q9HBX3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 ZNF204P-201ENST00000416749 2397 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-22P-201ENST00000363334 158 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 SNORD115-32-201ENST00000364079 82 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1240P-201ENST00000365155 104 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1031P-201ENST00000384773 107 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 SNORA67.5-201ENST00000391036 107 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-648P-201ENST00000410190 107 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 SRRM1P2-201ENST00000464531 1192 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RPS23P4-201ENST00000487908 423 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RPL23AP75-201ENST00000491601 451 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 AC010424.1-201ENST00000506336 297 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU7-40P-201ENST00000516397 64 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1198P-201ENST00000516904 67 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-835P-201ENST00000516974 104 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 MTND1P5-201ENST00000517906 940 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 AL929325.1-201ENST00000603096 117 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 AL050343.2-201ENST00000607338 280 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 ELL2P3-201ENST00000457883 1602 ntBASIC0.82□□□□□ -2.28
SND1-IT1Q9HBX3 ZNF209P-201ENST00000593450 2304 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 Y_RNA.111-201ENST00000363248 100 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 Y_RNA.231-201ENST00000364358 102 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 RNA5SP109-201ENST00000391010 116 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 MIR450B-201ENST00000401182 78 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 RN7SKP200-201ENST00000410564 320 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 CYCSP49-201ENST00000420810 319 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 MTCO1P19-201ENST00000443487 500 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AL133373.1-201ENST00000497098 94 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 SNORD116-28-201ENST00000516123 91 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-41P-201ENST00000516161 162 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-48P-201ENST00000516400 162 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 RNU6-1332P-201ENST00000516666 104 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 RNU1-92P-201ENST00000517017 135 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AC016957.1-201ENST00000534895 309 ntBASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.81□□□□□ -2.28
SND1-IT1Q9HBX3 AL158211.1-201ENST00000566763 763 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms