Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 Y_RNA.676-201ENST00000516393 96 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 RNA5SP384-201ENST00000516615 116 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-344P-201ENST00000516635 111 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 DEFB131C-201ENST00000528817 165 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 MIR5006-201ENST00000583027 110 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 MIR1302-1-201ENST00000637932 143 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 ZNF204P-201ENST00000416749 2397 ntBASIC2.2□□□□□ -2.06
POLR1BQ9H9Y6 RNU1-62P-201ENST00000362599 164 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.48-201ENST00000362710 103 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 SNORA6-201ENST00000384033 151 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-160P-201ENST00000384591 107 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 MIR518A2-201ENST00000384966 87 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-159P-201ENST00000391080 106 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 SNORA75.6-201ENST00000391318 127 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 AC007395.1-201ENST00000451333 677 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.653-201ENST00000459091 95 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 AC104435.1-201ENST00000483483 166 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 RPL17P19-201ENST00000489069 552 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 ATP5EP1-201ENST00000510257 156 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 RNA5SP458-201ENST00000516188 119 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
POLR1BQ9H9Y6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 SNORA16B-201ENST00000364674 135 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-310P-201ENST00000384655 107 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-331P-201ENST00000384724 107 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RNA5SP465-201ENST00000391195 109 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 AL355497.1-201ENST00000406262 551 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 AC007098.1-201ENST00000420122 367 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RPL23AP50-201ENST00000434149 455 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 MTCO3P8-201ENST00000453691 755 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RNU1-131P-201ENST00000458943 161 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-507P-201ENST00000516045 100 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 SCARNA16.2-201ENST00000516520 172 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 AC121758.2-201ENST00000553271 193 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 FRG2DP-202ENST00000566967 323 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 MIR219B-201ENST00000637023 88 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
POLR1BQ9H9Y6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 RNU1-139P-201ENST00000391307 165 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 MIR190B-201ENST00000401119 79 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.646-201ENST00000410980 101 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 MTCO2P27-201ENST00000420740 428 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 MTCO3P29-201ENST00000432119 779 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 ELOCP24-201ENST00000456370 334 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 AC114982.1-201ENST00000469402 321 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 AC090255.1-201ENST00000495779 349 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 RNU2-34P-201ENST00000516534 121 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-264P-201ENST00000517134 104 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 RNU2-19P-201ENST00000517288 84 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 SUB1P3-201ENST00000564581 315 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 AC009487.4-201ENST00000624969 3585 ntBASIC2.17□□□□□ -2.06
POLR1BQ9H9Y6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 RNU1-58P-201ENST00000362413 163 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.132-201ENST00000363421 102 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.259-201ENST00000364619 101 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.356-201ENST00000365475 113 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 Y_RNA.529-201ENST00000384586 119 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 SNORA64-201ENST00000384674 134 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 MIR586-201ENST00000385035 97 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 RNY4P36-201ENST00000391116 96 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 MIR1283-1-201ENST00000408494 87 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 MTND3P23-201ENST00000431980 347 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AC236972.2-201ENST00000434979 310 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AC074290.1-201ENST00000448883 135 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 MTND3P22-201ENST00000510932 243 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AL355375.2-201ENST00000574825 175 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 MIR4753-201ENST00000585119 83 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AL355802.3-201ENST00000607571 545 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 AC130454.1-201ENST00000622948 401 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 LINC02555-201ENST00000563933 1951 ntBASIC2.16□□□□□ -2.06
POLR1BQ9H9Y6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
POLR1BQ9H9Y6 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
POLR1BQ9H9Y6 Y_RNA.364-201ENST00000365532 101 ntBASIC2.15□□□□□ -2.07
POLR1BQ9H9Y6 Y_RNA.577-201ENST00000384794 101 ntBASIC2.15□□□□□ -2.07
POLR1BQ9H9Y6 MIR487A-201ENST00000385009 80 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms