Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC090616.3-201ENST00000582184 217 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AL365222.1-201ENST00000614661 98 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 TCL6_2.1-201ENST00000615162 119 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC002076.2-201ENST00000617362 122 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.778-201ENST00000620203 90 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC010889.1-201ENST00000566193 2666 ntBASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SEC61A2Q9H9S3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC010329.5-201ENST00000623497 2174 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 snoU2_19.1-201ENST00000362361 80 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 RNA5SP50-201ENST00000363731 107 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 U3.9-201ENST00000363823 204 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 SNORD115-30-201ENST00000364117 82 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 SNORA22C-201ENST00000384614 134 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 MIR7-3-201ENST00000384898 110 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.586-201ENST00000391146 98 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC245291.1-201ENST00000419501 328 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 CR769767.1-201ENST00000436337 346 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC112771.1-201ENST00000463581 102 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC021205.2-201ENST00000480069 347 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 RNU2-44P-201ENST00000516795 194 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 SNORD19.2-201ENST00000516978 73 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 IGKV2-26-201ENST00000518305 343 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC136628.3-201ENST00000521868 290 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC027176.1-201ENST00000560204 514 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC069294.1-201ENST00000608397 350 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC019176.2-201ENST00000611579 315 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 SNORA50A-202ENST00000629536 136 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC068205.3-201ENST00000636385 468 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
SEC61A2Q9H9S3 AC017071.1-201ENST00000564407 2204 ntBASIC3□□□□□ -1.93
SEC61A2Q9H9S3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-275P-201ENST00000364910 107 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 SNORD50B-201ENST00000364995 70 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 RNVU1-14-201ENST00000384770 164 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-344P-201ENST00000516635 111 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 MIR2276-201ENST00000516886 89 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 AC013791.1-201ENST00000616619 62 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 MIR7975-201ENST00000619350 68 ntBASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.99□□□□□ -1.93
SEC61A2Q9H9S3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-1010P-201ENST00000362757 107 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 RNA5SP383-201ENST00000362934 120 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 MIR569-201ENST00000385228 96 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-239P-201ENST00000390990 99 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 SNORA12-201ENST00000391162 147 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-257P-201ENST00000410238 98 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-855P-201ENST00000410395 104 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 RPL21P10-201ENST00000463521 490 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 MIR3684-201ENST00000579779 74 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 MIR4744-201ENST00000581563 82 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 MIR8058-201ENST00000615737 89 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.98□□□□□ -1.93
SEC61A2Q9H9S3 MIR148B-201ENST00000362252 99 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 SNORD46.1-201ENST00000364139 104 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 RNU1-33P-201ENST00000364249 162 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 SNORA70.4-201ENST00000365509 134 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 SNORA20-201ENST00000384662 132 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-578P-201ENST00000390980 103 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 AC009969.1-201ENST00000438726 172 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 HMGN1P18-201ENST00000457642 277 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 snoU13.14-201ENST00000459372 104 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 RPL32P34-201ENST00000486380 400 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 AC005840.1-201ENST00000498412 377 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 SNORA25.12-201ENST00000516202 82 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 RNU6-479P-201ENST00000516348 105 ntBASIC2.97□□□□□ -1.93
SEC61A2Q9H9S3 SNORA64.4-201ENST00000516632 81 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms