Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
VIPAS39Q9H9C1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-1305P-201ENST00000364353 104 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.279-201ENST00000364763 95 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.405-201ENST00000383979 100 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.451-201ENST00000384200 100 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 SNORA67.3-201ENST00000384366 140 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-601P-201ENST00000384540 107 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.524-201ENST00000384564 100 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.561-201ENST00000384694 100 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AL356432.1-201ENST00000405809 419 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 MIR1283-1-201ENST00000408494 87 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-1050P-201ENST00000410388 107 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RN7SKP192-201ENST00000411291 327 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-1304P-201ENST00000411374 106 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RPL37P10-201ENST00000412884 288 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RPL21P111-201ENST00000418453 477 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 PDCL2P1-201ENST00000419302 352 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC243428.1-201ENST00000421099 264 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 DPH3P2-201ENST00000422618 250 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC096638.1-201ENST00000444678 216 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RPL31P58-201ENST00000469001 379 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 TRBV12-1-201ENST00000479785 344 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RPL7P42-201ENST00000481005 679 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC046134.1-201ENST00000514454 666 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-58P-201ENST00000517143 103 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC087441.2-201ENST00000529141 262 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC026470.2-201ENST00000561492 181 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC009229.3-201ENST00000608056 282 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC013412.1-201ENST00000610687 192 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC083806.3-201ENST00000614016 455 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AC064859.1-201ENST00000624741 174 ntBASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
VIPAS39Q9H9C1 AL159152.1-201ENST00000635019 2587 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.88-201ENST00000363029 99 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-727P-201ENST00000363592 107 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.319-201ENST00000365138 92 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 Y_RNA.339-201ENST00000365325 102 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-331P-201ENST00000384724 107 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RN7SKP32-201ENST00000410167 303 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RNU4-14P-201ENST00000410858 122 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AL353997.1-201ENST00000432936 108 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 MTCO1P44-201ENST00000441935 243 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RPL23AP6-201ENST00000446637 472 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AC009237.7-201ENST00000447357 229 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 MTND3P10-201ENST00000450967 341 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RPS29P11-201ENST00000496507 171 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 SNORA25.14-201ENST00000516481 132 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-1016P-201ENST00000516689 94 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AL590705.4-201ENST00000532209 134 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 MIR4753-201ENST00000585119 83 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 7SK.7-201ENST00000603504 247 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AL773524.1-201ENST00000614065 229 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 AC022513.1-201ENST00000624512 117 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 ZNF299P-201ENST00000406845 1804 ntBASIC1.73□□□□□ -2.13
VIPAS39Q9H9C1 BX322639.1-202ENST00000423987 2213 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-595P-201ENST00000363944 107 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 MIR153-2-201ENST00000385225 87 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AL033519.2-201ENST00000403958 392 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AL158823.1-201ENST00000418441 478 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 RBMX2P4-201ENST00000441256 376 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AC007395.1-201ENST00000451333 677 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AC097473.1-201ENST00000508142 408 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 RNU7-175P-201ENST00000515915 61 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 RNA5SP384-201ENST00000516615 116 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AC027288.2-201ENST00000553028 243 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 AL355802.3-201ENST00000607571 545 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 uc_338.5-201ENST00000611839 155 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 RMST_6.1-201ENST00000611980 203 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.72□□□□□ -2.13
VIPAS39Q9H9C1 RNU6-873P-201ENST00000363833 107 ntBASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 SNORD81.2-201ENST00000365153 76 ntBASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 RNU6-596P-201ENST00000365395 98 ntBASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 Y_RNA.404-201ENST00000383978 102 ntBASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 MIR300-201ENST00000401138 83 ntBASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 MIR320B2-201ENST00000408479 138 ntBASIC1.71□□□□□ -2.14
VIPAS39Q9H9C1 Z98742.3-201ENST00000418637 326 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms