Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 RNA5SP361-201ENST00000362686 118 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU6-527P-201ENST00000363425 104 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU6-682P-201ENST00000363843 106 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU4-9P-201ENST00000364951 139 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU6-290P-201ENST00000365212 101 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.464-201ENST00000384282 110 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU6-125P-201ENST00000384505 107 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 MIR487A-201ENST00000385009 80 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
EBF3Q9H4W6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
EBF3Q9H4W6 SNORD78.2-201ENST00000391076 69 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AL512633.1-201ENST00000399931 655 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 EIF1P2-201ENST00000428233 350 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AL591043.1-201ENST00000432461 424 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AC009296.1-201ENST00000443146 155 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AL031183.1-201ENST00000457667 207 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU7-23P-201ENST00000459465 62 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RPL23AP49-201ENST00000492925 468 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 RNU6-1212P-201ENST00000517023 104 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 MIR2355-201ENST00000517199 87 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AC091144.1-201ENST00000519573 138 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 SNORD53-201ENST00000579969 78 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 AC104984.5-201ENST00000586878 94 ntBASIC2.68□□□□□ -1.98
EBF3Q9H4W6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
EBF3Q9H4W6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.199-201ENST00000364014 102 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 RNU6-1280P-201ENST00000365211 107 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 FTH1P15-201ENST00000406984 280 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.793-201ENST00000411222 111 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC243964.1-201ENST00000441814 261 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC016700.2-201ENST00000446011 156 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 RNU7-120P-201ENST00000459334 63 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AP000870.1-201ENST00000472927 406 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 MED28P2-201ENST00000475771 317 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 MRPL42P6-201ENST00000486397 371 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 SNORD116-28-201ENST00000516123 91 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 RNA5SP320-201ENST00000516263 124 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC109329.2-201ENST00000519658 482 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC022559.1-201ENST00000520905 205 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC006199.1-201ENST00000548728 219 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 HMGN2P15-201ENST00000585707 270 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC020895.1-201ENST00000595362 272 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC011921.3-201ENST00000605540 361 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC064859.1-201ENST00000624741 174 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 SNORA43.4-201ENST00000629559 138 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
EBF3Q9H4W6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.67□□□□□ -1.98
EBF3Q9H4W6 AC009541.1-201ENST00000438279 2662 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 ADAM3A-203ENST00000461344 2157 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNU6-47P-201ENST00000383866 107 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNU6-1286P-201ENST00000383871 107 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 SNORD21-201ENST00000383953 95 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNU6-968P-201ENST00000384076 107 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNU6-662P-201ENST00000384253 104 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNU6-198P-201ENST00000384258 104 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 SNORD63-201ENST00000384262 68 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 Y_RNA.506-201ENST00000384494 102 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 SNORD116-20-201ENST00000384529 92 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNU4-30P-201ENST00000410245 143 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 HMGN2P35-201ENST00000412164 270 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 COX6CP10-201ENST00000416832 224 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AC074117.2-201ENST00000417130 397 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AL445305.1-201ENST00000432577 575 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AC005002.2-201ENST00000438228 269 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RPL26P26-201ENST00000480251 434 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 RNA5SP24-201ENST00000516478 95 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AC087441.2-201ENST00000529141 262 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AC024405.2-202ENST00000532731 184 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 AL356157.2-201ENST00000605122 111 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 MIR3199-2-201ENST00000636243 86 ntBASIC2.66□□□□□ -1.98
EBF3Q9H4W6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.66□□□□□ -1.98
EBF3Q9H4W6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.98
EBF3Q9H4W6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
EBF3Q9H4W6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNA5SP289-201ENST00000362332 137 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNU6-740P-201ENST00000364734 105 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 SNORD32A-201ENST00000364805 84 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNY4P28-201ENST00000365281 93 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 SNORA70B-201ENST00000384210 135 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.504-201ENST00000384481 104 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 MIR32-201ENST00000384965 70 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNU6-1140P-201ENST00000410517 106 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RN7SKP51-201ENST00000410781 304 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.626-201ENST00000411288 95 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms