Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NBPF3Q9H094 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.84□□□□□ -1.63
NBPF3Q9H094 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
NBPF3Q9H094 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NBPF3Q9H094 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NBPF3Q9H094 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NBPF3Q9H094 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NBPF3Q9H094 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.84□□□□□ -1.64
NBPF3Q9H094 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
NBPF3Q9H094 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
NBPF3Q9H094 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.84□□□□□ -1.64
NBPF3Q9H094 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.84□□□□□ -1.64
NBPF3Q9H094 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.84□□□□□ -1.64
NBPF3Q9H094 AL159152.1-201ENST00000635019 2587 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NBPF3Q9H094 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NBPF3Q9H094 AC016588.2-201ENST00000632484 3021 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 Y_RNA.40-201ENST00000362645 93 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 RNU6-414P-201ENST00000363705 104 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 RNY1P1-201ENST00000364372 112 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 AC080013.2-201ENST00000460866 323 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 Vault.1-201ENST00000516474 102 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 RNU4ATAC17P-201ENST00000517272 120 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.83□□□□□ -1.64
NBPF3Q9H094 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NBPF3Q9H094 SNRPGP15-201ENST00000600149 222 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 AL929325.1-201ENST00000603096 117 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 AC007179.3-201ENST00000604976 235 ntBASIC4.83□□□□□ -1.64
NBPF3Q9H094 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NBPF3Q9H094 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
NBPF3Q9H094 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
NBPF3Q9H094 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.82□□□□□ -1.64
NBPF3Q9H094 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.82□□□□□ -1.64
NBPF3Q9H094 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 SNORA27.1-201ENST00000362604 124 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 RNY4P6-201ENST00000363667 96 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 RNU6-1276P-201ENST00000365372 104 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 SNORA26-201ENST00000391286 122 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 AL117342.1-201ENST00000404861 406 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 MIR1185-2-201ENST00000408687 86 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 RNU2-13P-201ENST00000515909 113 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 RNA5SP367-201ENST00000516557 118 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 RNU6-113P-201ENST00000516653 101 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.82□□□□□ -1.64
NBPF3Q9H094 MIR6868-201ENST00000611215 58 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 MIR7702-201ENST00000621931 59 ntBASIC4.82□□□□□ -1.64
NBPF3Q9H094 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NBPF3Q9H094 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
NBPF3Q9H094 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NBPF3Q9H094 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NBPF3Q9H094 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NBPF3Q9H094 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NBPF3Q9H094 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NBPF3Q9H094 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
NBPF3Q9H094 Y_RNA.66-201ENST00000362862 102 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 Y_RNA.198-201ENST00000364013 98 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 SNORA1-201ENST00000384107 130 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 MIR513A2-201ENST00000385249 127 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 MIR493-201ENST00000385254 89 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 AL133475.1-201ENST00000404414 305 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 AL353705.1-201ENST00000433468 480 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.81□□□□□ -1.64
NBPF3Q9H094 AL356535.1-201ENST00000440335 398 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 HMGN2P21-201ENST00000447764 270 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 AC145146.1-201ENST00000496370 254 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 RNU6-1282P-201ENST00000516735 96 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 Pinc.1-201ENST00000616452 154 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 AC002064.3-201ENST00000623448 346 ntBASIC4.81□□□□□ -1.64
NBPF3Q9H094 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
NBPF3Q9H094 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NBPF3Q9H094 SNORA63D-201ENST00000364359 132 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 RNU6-787P-201ENST00000384032 107 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 RNU6-279P-201ENST00000391297 101 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 SNORD11-201ENST00000459124 84 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC139453.2-201ENST00000487255 133 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 RNU6-830P-201ENST00000516353 107 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.8□□□□□ -1.64
NBPF3Q9H094 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC021739.1-201ENST00000559631 174 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC105137.2-201ENST00000569073 466 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC019176.2-201ENST00000611579 315 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 IGLL4P-201ENST00000614590 133 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 AC012314.7-201ENST00000619693 93 ntBASIC4.8□□□□□ -1.64
NBPF3Q9H094 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.8□□□□□ -1.64
NBPF3Q9H094 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NBPF3Q9H094 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.8□□□□□ -1.64
NBPF3Q9H094 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.8□□□□□ -1.64
NBPF3Q9H094 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.79□□□□□ -1.64
NBPF3Q9H094 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
NBPF3Q9H094 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.79□□□□□ -1.64
NBPF3Q9H094 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms