Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
CCSER1Q9C0I3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.86-201ENST00000363020 111 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 RNU4-13P-201ENST00000364019 141 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.248-201ENST00000364501 109 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 RNU6-60P-201ENST00000364792 103 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 SNORA32.2-201ENST00000384049 122 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 RNU6-1013P-201ENST00000384180 107 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 RNU6-933P-201ENST00000384424 107 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 RNU6-1026P-201ENST00000384465 108 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 AL590632.1-201ENST00000424289 371 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 RNVU1-2-201ENST00000516326 135 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 AC060780.3-201ENST00000589464 80 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 Z98751.3-201ENST00000604447 521 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 BNIP3P10-201ENST00000605360 577 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 AC005520.5-201ENST00000613926 164 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 AL359697.1-201ENST00000624879 587 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 AP000648.3-201ENST00000623539 4507 ntBASIC1.67□□□□□ -2.14
CCSER1Q9C0I3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 SNORD31B-201ENST00000364977 69 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 EBAG9P1-201ENST00000418955 543 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 MTND4LP16-201ENST00000440828 295 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 SNORD53B-201ENST00000577887 78 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 AC093913.1-201ENST00000614178 329 ntBASIC1.66□□□□□ -2.14
CCSER1Q9C0I3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
CCSER1Q9C0I3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
CCSER1Q9C0I3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.151-201ENST00000363566 112 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 SNORD114-6-201ENST00000364393 72 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 SNORA36A-201ENST00000384221 132 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 RNU6-784P-201ENST00000384330 106 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 MIR521-1-201ENST00000384902 87 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 RNU6-510P-201ENST00000391239 108 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC007098.1-201ENST00000420122 367 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC012306.1-201ENST00000423267 114 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.638-201ENST00000459374 113 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC130509.1-201ENST00000464158 433 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC023790.1-201ENST00000482174 347 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC025465.3-201ENST00000510570 311 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 RNU4-49P-201ENST00000516080 140 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 SUB1P4-201ENST00000566062 339 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 MIR8074-201ENST00000615081 81 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 AC009248.2-201ENST00000619826 254 ntBASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.65□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.72-201ENST00000362894 103 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.301-201ENST00000364990 103 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 MIR208B-201ENST00000401172 77 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RNU4-62P-201ENST00000410125 130 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 HMGB1P18-201ENST00000438801 619 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 DAP3P1-201ENST00000441522 278 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC007395.1-201ENST00000451333 677 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RNU7-14P-201ENST00000459331 62 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RNU6-329P-201ENST00000459618 107 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RPS23P5-201ENST00000495419 428 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC021146.2-201ENST00000504736 556 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 HMGN1P13-201ENST00000505795 138 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC018710.1-201ENST00000506509 158 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AL117351.2-201ENST00000513571 157 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 RNA5SP454-201ENST00000517231 127 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 FGF7P1-201ENST00000582820 288 ntBASIC1.64□□□□□ -2.15
CCSER1Q9C0I3 AL645939.4-201ENST00000604495 135 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms