Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC087683.2-201ENST00000611384 326 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 AL513423.1-201ENST00000621695 132 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 snoZ196.1-201ENST00000625269 89 ntBASIC0.52□□□□□ -2.33
NKX6-2Q9C056 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
NKX6-2Q9C056 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
NKX6-2Q9C056 MIR378A-201ENST00000362177 66 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 RNA5SP361-201ENST00000362686 118 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 MIR200A-201ENST00000384875 90 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 MIR660-201ENST00000385235 97 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AL355796.1-201ENST00000406706 323 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 RNU2-29P-201ENST00000410423 189 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 RPS26P42-201ENST00000413485 326 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AC133104.1-201ENST00000429100 218 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AL591806.2-201ENST00000433122 173 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AL033528.1-201ENST00000453780 140 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 RNU7-138P-201ENST00000459479 64 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 COX6CP14-201ENST00000469580 174 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AC025647.1-201ENST00000517879 253 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AL137161.1-201ENST00000532231 390 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 MRPS36P4-201ENST00000534436 298 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AC090616.2-202ENST00000584248 222 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AL590095.2-201ENST00000604136 117 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 AC139792.3-201ENST00000623525 224 ntBASIC0.51□□□□□ -2.33
NKX6-2Q9C056 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.51□□□□□ -2.33
NKX6-2Q9C056 MTND4P5-201ENST00000435821 1374 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AP000568.1-201ENST00000282964 442 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 Y_RNA.123-201ENST00000363338 102 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RNU6-1286P-201ENST00000383871 107 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RNU6-297P-201ENST00000384636 107 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RNU6-606P-201ENST00000384721 111 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RNU6-482P-201ENST00000391068 107 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 MRPL42P3-201ENST00000401492 326 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AL034345.1-201ENST00000407768 123 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RNU6-584P-201ENST00000410350 95 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC008134.1-201ENST00000420943 193 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RNU7-125P-201ENST00000458760 62 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC117454.1-201ENST00000491120 168 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 TRBVA-201ENST00000498804 316 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 RN7SKP219-201ENST00000516825 296 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC104576.1-201ENST00000524225 88 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX6-2Q9C056 MIR4698-201ENST00000577795 80 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC011458.1-201ENST00000604034 617 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AP001596.2-201ENST00000608410 312 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC073349.3-201ENST00000617616 186 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AF246928.1-201ENST00000623768 87 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC008873.1-201ENST00000625051 138 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 SCARNA4-201ENST00000629045 128 ntBASIC0.5□□□□□ -2.33
NKX6-2Q9C056 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU6-181P-201ENST00000363225 107 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU6-1240P-201ENST00000365155 104 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU4-12P-201ENST00000365233 139 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 SNORA80D-201ENST00000384488 135 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 MIR487A-201ENST00000385009 80 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNA5SP219-201ENST00000390940 113 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU6-903P-201ENST00000391270 109 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AC108667.1-201ENST00000428618 249 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AL121890.1-201ENST00000435457 205 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 STAG3L5P-204ENST00000443759 179 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AF186996.7-201ENST00000492781 209 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU6-759P-201ENST00000516740 103 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU6-445P-201ENST00000516949 107 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 RNU7-128P-201ENST00000517247 62 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.49□□□□□ -2.33
NKX6-2Q9C056 HIF1AP1-201ENST00000553642 175 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 SUB1P2-201ENST00000556401 297 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.49□□□□□ -2.33
NKX6-2Q9C056 MIR3941-201ENST00000582572 103 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AC005014.3-201ENST00000605985 190 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AC008536.2-201ENST00000607284 349 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AL353997.5-201ENST00000618886 171 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 AC009161.2-201ENST00000624626 138 ntBASIC0.49□□□□□ -2.33
NKX6-2Q9C056 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.49□□□□□ -2.33
NKX6-2Q9C056 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
NKX6-2Q9C056 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
NKX6-2Q9C056 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RNU6-199P-201ENST00000362954 107 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RNU6-1317P-201ENST00000364582 104 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RNU6-1080P-201ENST00000383982 107 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 SNORA67.2-201ENST00000384300 149 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 MIR1261-201ENST00000408659 82 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RNU6-1037P-201ENST00000459571 107 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RPS26P48-201ENST00000491713 339 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RNU6-1129P-201ENST00000515964 104 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 RNU6-113P-201ENST00000516653 101 ntBASIC0.48□□□□□ -2.33
NKX6-2Q9C056 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.48□□□□□ -2.33
NKX6-2Q9C056 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 350.4 ms