Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AC092423.1-201ENST00000430165 186 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 FABP5P4-201ENST00000437203 171 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.32□□□□□ -2.36
TRIM4Q9C037 AC013470.1-201ENST00000453438 462 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 RNU7-90P-201ENST00000459216 62 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.32□□□□□ -2.36
TRIM4Q9C037 RNU6-1069P-201ENST00000516612 133 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.32□□□□□ -2.36
TRIM4Q9C037 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.32□□□□□ -2.36
TRIM4Q9C037 AC022217.4-201ENST00000604389 163 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 AC064807.4-201ENST00000607201 407 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 AL513423.1-201ENST00000621695 132 ntBASIC0.32□□□□□ -2.36
TRIM4Q9C037 MIR653-201ENST00000385279 96 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 SNORA12.1-201ENST00000390873 148 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 RNA5SP299-201ENST00000391203 116 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 RPS29P13-201ENST00000402041 169 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 RNU6-757P-201ENST00000410334 100 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 AC119618.1-201ENST00000434191 222 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.31□□□□□ -2.36
TRIM4Q9C037 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 AC010587.1-201ENST00000505809 469 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 AC007834.2-201ENST00000536310 343 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC0.31□□□□□ -2.36
TRIM4Q9C037 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC0.31□□□□□ -2.36
TRIM4Q9C037 MIR8054-201ENST00000620877 86 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 AC006001.4-201ENST00000622243 395 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.31□□□□□ -2.36
TRIM4Q9C037 CASC19-280ENST00000642102 1351 ntBASIC0.31□□□□□ -2.36
TRIM4Q9C037 SNORD116-13-201ENST00000384408 92 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 SNORD99-201ENST00000408612 74 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 AC090960.1-201ENST00000421072 306 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.3□□□□□ -2.36
TRIM4Q9C037 MTCO2P29-201ENST00000465212 189 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 AL049830.1-201ENST00000468034 425 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.3□□□□□ -2.36
TRIM4Q9C037 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
TRIM4Q9C037 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.3□□□□□ -2.36
TRIM4Q9C037 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.3□□□□□ -2.36
TRIM4Q9C037 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.3□□□□□ -2.36
TRIM4Q9C037 Z99497.2-201ENST00000603634 310 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 AC008250.2-201ENST00000615261 205 ntBASIC0.3□□□□□ -2.36
TRIM4Q9C037 Y_RNA.22-201ENST00000362492 102 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 Y_RNA.302-201ENST00000364997 102 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 RNU6-975P-201ENST00000384296 105 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 RNU6-1237P-201ENST00000384777 107 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 MIR660-201ENST00000385235 97 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 MIR549A-201ENST00000385268 96 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AL022718.1-201ENST00000412004 84 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC233266.1-201ENST00000454518 96 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC008628.2-201ENST00000502605 298 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC010486.2-201ENST00000505572 483 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 NAF1-205ENST00000509434 385 ntTSL 3 BASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.29□□□□□ -2.36
TRIM4Q9C037 MIR4778-201ENST00000577635 80 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 MIR5190-201ENST00000581537 80 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AL360219.1-201ENST00000610230 366 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC242852.1-201ENST00000612151 96 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AL138726.1-201ENST00000614873 333 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 Pinc.1-201ENST00000616452 154 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 AC244015.1-201ENST00000622301 99 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 MIR6516-201ENST00000630554 81 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 U6.108-201ENST00000637764 58 ntBASIC0.29□□□□□ -2.36
TRIM4Q9C037 RNA5SP368-201ENST00000364298 116 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 RNU6-1303P-201ENST00000364841 107 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
TRIM4Q9C037 RNU6-116P-201ENST00000384042 109 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 RNU6-1093P-201ENST00000391194 107 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 RNU6-387P-201ENST00000411331 105 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.28□□□□□ -2.36
TRIM4Q9C037 AC012306.1-201ENST00000423267 114 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 RPL37P21-201ENST00000435890 276 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 AL606662.1-201ENST00000445763 553 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 AL031313.1-201ENST00000448435 256 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.28□□□□□ -2.36
TRIM4Q9C037 AC090049.2-201ENST00000550377 109 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 PRELID3BP2-201ENST00000605362 201 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 AL136221.1-201ENST00000621449 509 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 SNORA43.4-201ENST00000629559 138 ntBASIC0.28□□□□□ -2.36
TRIM4Q9C037 RNU6-179P-201ENST00000363350 107 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 Y_RNA.185-201ENST00000363894 100 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 Y_RNA.576-201ENST00000384781 102 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 RNU6-440P-201ENST00000390882 105 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 SNORD115.1-201ENST00000391109 76 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 MIR1253-201ENST00000408273 105 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 RNA5SP25-201ENST00000410815 110 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 AL117339.3-201ENST00000418733 162 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 RPL39P39-201ENST00000455840 151 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 CYCTP-201ENST00000504253 315 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 AC016550.1-201ENST00000505348 785 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 AC104136.1-201ENST00000512969 394 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 AC025465.4-201ENST00000513422 638 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 RNA5SP134-201ENST00000516492 96 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 MTND4LP18-201ENST00000526864 291 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 AP003181.2-201ENST00000528941 181 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.27□□□□□ -2.37
TRIM4Q9C037 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 369.1 ms