Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 SEPT14P8-201ENST00000508026 178 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 SERF1AP1-201ENST00000514575 187 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AC023824.2-201ENST00000566185 400 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 MIR4524B-201ENST00000581569 115 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 MIR6817-201ENST00000615588 66 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 AC010297.1-201ENST00000623948 149 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SALL3Q9BXA9 HAUS6P2-201ENST00000433254 2404 ntBASIC3.02□□□□□ -1.93
SALL3Q9BXA9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNU4-82P-201ENST00000362443 140 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 SNORD115-8-201ENST00000363856 82 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNU6-884P-201ENST00000363889 107 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNU6-1141P-201ENST00000364520 107 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.277-201ENST00000364754 102 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.297-201ENST00000364950 91 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 SNORD115-38-201ENST00000365037 82 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNU6-290P-201ENST00000365212 101 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNA5SP240-201ENST00000365355 128 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNU6-937P-201ENST00000384325 106 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNU6-843P-201ENST00000384454 104 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MIR504-201ENST00000385065 83 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RNA5SP354-201ENST00000391247 136 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AL359511.1-201ENST00000402970 211 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AL033519.2-201ENST00000403958 392 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC096638.1-201ENST00000444678 216 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MED28P2-201ENST00000475771 317 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AF186996.7-201ENST00000492781 209 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 RN7SKP49-201ENST00000516675 260 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AK6P2-201ENST00000549020 471 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MIR3670-2-201ENST00000582974 65 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MIR3670-1-201ENST00000584160 65 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MIR3670-3-201ENST00000584855 65 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC103810.6-201ENST00000606708 136 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 SNORD113-5-201ENST00000607261 78 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MIR3670-4-201ENST00000612260 65 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC097372.5-201ENST00000623665 376 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC127459.3-201ENST00000624328 466 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 AC132825.6-201ENST00000638861 357 ntBASIC3.01□□□□□ -1.93
SALL3Q9BXA9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
SALL3Q9BXA9 MIR6073-201ENST00000352083 89 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.16-201ENST00000362421 102 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.269-201ENST00000364685 89 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RNU6-326P-201ENST00000365480 107 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RNU6-281P-201ENST00000384212 103 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RNU6-1035P-201ENST00000384477 107 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 SNORD116-20-201ENST00000384529 92 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RNU6-493P-201ENST00000391321 108 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RN7SKP61-201ENST00000410642 295 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3□□□□□ -1.93
SALL3Q9BXA9 AP000870.1-201ENST00000472927 406 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RPS27AP9-201ENST00000477681 438 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 RNA5SP148-201ENST00000516527 94 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3□□□□□ -1.93
SALL3Q9BXA9 AC004486.1-201ENST00000546846 233 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 MIR4423-201ENST00000580922 80 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 AC019159.1-201ENST00000605094 187 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 AL138963.2-201ENST00000605137 226 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 U2.14-201ENST00000615943 113 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
SALL3Q9BXA9 SNORA43.4-201ENST00000629559 138 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 AC110079.1-202ENST00000635213 138 ntBASIC3□□□□□ -1.93
SALL3Q9BXA9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SALL3Q9BXA9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SALL3Q9BXA9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3□□□□□ -1.93
SALL3Q9BXA9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 MIR21-201ENST00000362134 72 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 RNU6-222P-201ENST00000362438 107 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.54-201ENST00000362766 105 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 RNU6-270P-201ENST00000364131 105 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.274-201ENST00000364714 101 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 RNU6-740P-201ENST00000364734 105 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 RNU6-159P-201ENST00000391080 106 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 RNA5SP390-201ENST00000410191 113 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 Y_RNA.602-201ENST00000410535 92 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AL390729.2-201ENST00000416137 156 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AL358075.3-201ENST00000426289 226 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 HMGN2P10-201ENST00000448085 265 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.99□□□□□ -1.93
SALL3Q9BXA9 HSPE1P25-201ENST00000455484 251 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC016632.1-201ENST00000503994 196 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC091874.1-201ENST00000511402 339 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC027288.2-201ENST00000553028 243 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC067747.1-201ENST00000608026 250 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 MIR3529-201ENST00000637713 78 ntBASIC2.99□□□□□ -1.93
SALL3Q9BXA9 AC010680.1-201ENST00000590024 3590 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms