Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU7-57P-201ENST00000459540 60 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 AP000870.1-201ENST00000472927 406 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 LRRC34P2-201ENST00000514850 553 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 RNA5SP216-201ENST00000516111 123 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 MTND4LP25-201ENST00000570218 163 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 AC068790.2-201ENST00000602601 557 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 AC012467.1-201ENST00000607740 256 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 AC008250.2-201ENST00000615261 205 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 AC005562.2-201ENST00000618264 111 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 AC006386.1-201ENST00000619436 415 ntBASIC-0.2□□□□□ -2.44
VPS25Q9BRG1 RNU6-654P-201ENST00000364373 107 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 MIR32-201ENST00000384965 70 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 MTND3P20-201ENST00000407663 186 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 RNA5SP95-201ENST00000410319 137 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 TAF9P1-201ENST00000445421 515 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 TAF9P2-201ENST00000454958 515 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 RNU7-12P-201ENST00000516030 62 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 SNORA62.5-201ENST00000516634 120 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 RNA5SP337-201ENST00000517007 109 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC025647.1-201ENST00000517879 253 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC103996.1-201ENST00000555468 102 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AL137100.2-201ENST00000555786 315 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC009712.1-201ENST00000564938 316 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 MIR4452-201ENST00000583004 71 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 MIR4290-201ENST00000583807 95 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AL139022.2-201ENST00000606934 443 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC024060.1-201ENST00000607052 494 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC064807.4-201ENST00000607201 407 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AL512427.1-201ENST00000618593 349 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC015726.2-201ENST00000620112 122 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC068880.4-201ENST00000623082 495 ntBASIC-0.21□□□□□ -2.44
VPS25Q9BRG1 AC005592.1-201ENST00000566527 1640 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AC073343.1-201ENST00000328239 651 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AL136310.1-201ENST00000404926 654 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AC008628.2-201ENST00000502605 298 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 RN7SKP164-201ENST00000516138 266 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 RNA5SP227-201ENST00000516184 113 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 RNU6-567P-201ENST00000516746 107 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AC023050.3-201ENST00000541142 333 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AC004584.2-201ENST00000570407 410 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 MIR3612-201ENST00000579753 87 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 7SK.7-201ENST00000603504 247 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 AC019226.2-201ENST00000625973 424 ntBASIC-0.22□□□□□ -2.44
VPS25Q9BRG1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 SNORA63.3-201ENST00000362682 132 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 AL353997.1-201ENST00000432936 108 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 AC013470.1-201ENST00000453438 462 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 MTCO3P8-201ENST00000453691 755 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 RNU7-41P-201ENST00000515917 61 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 RNU6-1223P-201ENST00000517124 104 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 MIR4307-201ENST00000582802 84 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 AL162424.1-201ENST00000602325 221 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 RNU6-88P-201ENST00000606801 100 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 MIR6718-201ENST00000616153 80 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.23□□□□□ -2.45
VPS25Q9BRG1 RNU6-369P-201ENST00000362515 102 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 RNU6-61P-201ENST00000365528 109 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 RPS29P13-201ENST00000402041 169 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 SNORA40.8-201ENST00000411034 126 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AL353777.1-201ENST00000425552 326 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 SEPT7P4-201ENST00000437076 306 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AC116353.3-201ENST00000511215 249 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AC074133.1-201ENST00000515696 183 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 RNU4-77P-201ENST00000516692 156 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AC022616.6-201ENST00000520479 119 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AC023932.2-201ENST00000603176 175 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AL078595.3-201ENST00000623815 1166 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 AC004808.1-201ENST00000627671 721 ntBASIC-0.24□□□□□ -2.45
VPS25Q9BRG1 MIR1-1-201ENST00000362147 71 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 SNORD114-23-201ENST00000363536 72 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 MIR520G-201ENST00000385064 90 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 MIR520H-201ENST00000385126 88 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 SNORD111-201ENST00000408139 94 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 MIR1276-201ENST00000408707 83 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 RNU2-8P-201ENST00000410727 190 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 SNORD71-201ENST00000411292 86 ntBASIC-0.25□□□□□ -2.45
VPS25Q9BRG1 AL117339.3-201ENST00000418733 162 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms