Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 MTND4P1-201ENST00000457501 1466 ntBASIC2.11□□□□□ -2.07
PKP2Q99959 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PKP2Q99959 RNU6-1141P-201ENST00000364520 107 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 RNU6-546P-201ENST00000383991 107 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 RNU6-639P-201ENST00000384074 107 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 RNU6-1156P-201ENST00000410365 100 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 RNU2-32P-201ENST00000411193 191 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC2.1□□□□□ -2.07
PKP2Q99959 AL160004.2-201ENST00000432935 350 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AL603825.1-201ENST00000438481 80 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 GPM6BP3-201ENST00000442797 145 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 RPL39P29-201ENST00000447779 157 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AL021397.1-201ENST00000451806 248 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.1□□□□□ -2.07
PKP2Q99959 RPL30P10-201ENST00000488148 337 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.1□□□□□ -2.07
PKP2Q99959 RNU6-327P-201ENST00000516270 127 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PKP2Q99959 MRPS36P4-201ENST00000534436 298 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.1□□□□□ -2.07
PKP2Q99959 AC092447.9-201ENST00000603395 144 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AC103810.6-201ENST00000606708 136 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AL355802.3-201ENST00000607571 545 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 SNORA43.4-201ENST00000629559 138 ntBASIC2.1□□□□□ -2.07
PKP2Q99959 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.1□□□□□ -2.07
PKP2Q99959 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PKP2Q99959 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PKP2Q99959 U3.13-201ENST00000364804 214 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RNA5SP160-201ENST00000364866 120 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 Y_RNA.364-201ENST00000365532 101 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AC117470.1-201ENST00000381974 330 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RNU6-1222P-201ENST00000384615 107 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 MIR29B2-201ENST00000385055 81 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
PKP2Q99959 MIR1289-2-201ENST00000408360 111 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RN7SKP61-201ENST00000410642 295 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RNA5SP494-201ENST00000410653 129 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 Z98742.3-201ENST00000418637 326 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 EIF1AXP1-201ENST00000419267 435 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AL358453.1-201ENST00000422522 250 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.09□□□□□ -2.07
PKP2Q99959 RN7SKP210-201ENST00000459176 261 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RPS27P21-201ENST00000486977 252 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RPL30P1-201ENST00000488676 339 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 HMGB1P35-201ENST00000503360 598 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.09□□□□□ -2.07
PKP2Q99959 SNORA25.10-201ENST00000515926 124 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RNU4-77P-201ENST00000516692 156 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 RNU6-1137P-201ENST00000517073 99 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AC023442.1-201ENST00000531247 422 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AL590705.4-201ENST00000532209 134 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.09□□□□□ -2.07
PKP2Q99959 AC004584.2-201ENST00000570407 410 ntBASIC2.09□□□□□ -2.07
PKP2Q99959 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.09□□□□□ -2.07
PKP2Q99959 AC233981.2-201ENST00000611524 1614 ntBASIC2.09□□□□□ -2.08
PKP2Q99959 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
PKP2Q99959 RNU6-1285P-201ENST00000363480 105 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 Y_RNA.158-201ENST00000363651 101 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 Y_RNA.314-201ENST00000365114 102 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 RNU6-1286P-201ENST00000383871 107 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 RNU6-968P-201ENST00000384076 107 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 RNU4-52P-201ENST00000384209 138 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
PKP2Q99959 RNU6-700P-201ENST00000391043 107 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MRPL42P3-201ENST00000401492 326 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 RNA5SP425-201ENST00000410336 112 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MTCYBP10-201ENST00000424905 650 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MTCO3P29-201ENST00000432119 779 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.08□□□□□ -2.08
PKP2Q99959 AL353705.4-201ENST00000449661 238 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 CHEK2P4-201ENST00000450340 246 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 SNRPGP7-201ENST00000469016 106 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 HMGN1P10-201ENST00000474557 553 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 AC104564.1-201ENST00000493028 407 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.08□□□□□ -2.08
PKP2Q99959 RNA5SP458-201ENST00000516188 119 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 RNU6-1045P-201ENST00000516321 107 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 HSPE1P4-201ENST00000550617 308 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.08□□□□□ -2.08
PKP2Q99959 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.08□□□□□ -2.08
PKP2Q99959 MIR4287-201ENST00000579398 78 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MIR4680-201ENST00000580906 66 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MIR5007-201ENST00000583098 95 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 AC046143.2-201ENST00000609789 160 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MIR1244-1-201ENST00000612829 85 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 AL159153.1-201ENST00000619688 317 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.08□□□□□ -2.08
PKP2Q99959 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.08□□□□□ -2.08
PKP2Q99959 MIR1244-3-201ENST00000635744 85 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MIR1244-2-201ENST00000636449 85 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 MIR1244-4-202ENST00000636813 85 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 AL450472.1-202ENST00000637286 180 ntBASIC2.08□□□□□ -2.08
PKP2Q99959 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.08□□□□□ -2.08
PKP2Q99959 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 149.2 ms