Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC010186.2-204ENST00000537668 439 ntBASIC2.55□□□□□ -2
MEIS3Q99687 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.55□□□□□ -2
MEIS3Q99687 AC093023.1-201ENST00000547375 507 ntBASIC2.55□□□□□ -2
MEIS3Q99687 UBL5P4-201ENST00000562584 236 ntBASIC2.55□□□□□ -2
MEIS3Q99687 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.55□□□□□ -2
MEIS3Q99687 MIR4659A-201ENST00000580269 81 ntBASIC2.55□□□□□ -2
MEIS3Q99687 RPL23AP88-201ENST00000605759 454 ntBASIC2.55□□□□□ -2
MEIS3Q99687 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.55□□□□□ -2
MEIS3Q99687 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.54□□□□□ -2
MEIS3Q99687 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
MEIS3Q99687 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.54□□□□□ -2
MEIS3Q99687 U3.13-201ENST00000364804 214 ntBASIC2.54□□□□□ -2
MEIS3Q99687 SNORD32A-201ENST00000364805 84 ntBASIC2.54□□□□□ -2
MEIS3Q99687 RNU6-209P-201ENST00000384118 107 ntBASIC2.54□□□□□ -2
MEIS3Q99687 Y_RNA.439-201ENST00000384119 94 ntBASIC2.54□□□□□ -2
MEIS3Q99687 Y_RNA.462-201ENST00000384268 102 ntBASIC2.54□□□□□ -2
MEIS3Q99687 Y_RNA.504-201ENST00000384481 104 ntBASIC2.54□□□□□ -2
MEIS3Q99687 MIR544A-201ENST00000384855 91 ntBASIC2.54□□□□□ -2
MEIS3Q99687 SNORD115-46-201ENST00000390982 71 ntBASIC2.54□□□□□ -2
MEIS3Q99687 AL603910.2-201ENST00000407268 136 ntBASIC2.54□□□□□ -2
MEIS3Q99687 RNU6-1140P-201ENST00000410517 106 ntBASIC2.54□□□□□ -2
MEIS3Q99687 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.54□□□□□ -2
MEIS3Q99687 OOSP1P1-201ENST00000423265 274 ntBASIC2.54□□□□□ -2
MEIS3Q99687 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.54□□□□□ -2
MEIS3Q99687 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.54□□□□□ -2
MEIS3Q99687 snoU13.6-201ENST00000458785 104 ntBASIC2.54□□□□□ -2
MEIS3Q99687 AC087477.1-201ENST00000465747 340 ntBASIC2.54□□□□□ -2
MEIS3Q99687 MRPL42P6-201ENST00000486397 371 ntBASIC2.54□□□□□ -2
MEIS3Q99687 RN7SKP282-201ENST00000516824 299 ntBASIC2.54□□□□□ -2
MEIS3Q99687 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.54□□□□□ -2
MEIS3Q99687 AC090617.3-201ENST00000573670 475 ntBASIC2.54□□□□□ -2
MEIS3Q99687 MIR5089-201ENST00000580047 84 ntBASIC2.54□□□□□ -2
MEIS3Q99687 AL512605.2-201ENST00000592972 256 ntBASIC2.54□□□□□ -2
MEIS3Q99687 AL365434.2-201ENST00000607979 234 ntBASIC2.54□□□□□ -2
MEIS3Q99687 AC141273.2-201ENST00000618989 130 ntBASIC2.54□□□□□ -2
MEIS3Q99687 AC103988.1-201ENST00000566382 2177 ntBASIC2.54□□□□□ -2
MEIS3Q99687 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
MEIS3Q99687 RNU6-1301P-201ENST00000362724 104 ntBASIC2.53□□□□□ -2
MEIS3Q99687 RNU6-879P-201ENST00000364328 108 ntBASIC2.53□□□□□ -2
MEIS3Q99687 SNORA14A-201ENST00000364773 135 ntBASIC2.53□□□□□ -2
MEIS3Q99687 RNU4-9P-201ENST00000364951 139 ntBASIC2.53□□□□□ -2
MEIS3Q99687 Y_RNA.416-201ENST00000384014 113 ntBASIC2.53□□□□□ -2
MEIS3Q99687 SNORA29-201ENST00000384183 140 ntBASIC2.53□□□□□ -2
MEIS3Q99687 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.53□□□□□ -2
MEIS3Q99687 AL133475.1-201ENST00000404414 305 ntBASIC2.53□□□□□ -2
MEIS3Q99687 MIR548I3-201ENST00000408378 149 ntBASIC2.53□□□□□ -2
MEIS3Q99687 MIR548I1-201ENST00000408810 149 ntBASIC2.53□□□□□ -2
MEIS3Q99687 RNA5SP338-201ENST00000410495 85 ntBASIC2.53□□□□□ -2
MEIS3Q99687 WARS2P1-201ENST00000429678 537 ntBASIC2.53□□□□□ -2
MEIS3Q99687 MTATP6P7-201ENST00000453315 681 ntBASIC2.53□□□□□ -2
MEIS3Q99687 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
MEIS3Q99687 MIR4643-201ENST00000577473 78 ntBASIC2.53□□□□□ -2
MEIS3Q99687 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.53□□□□□ -2
MEIS3Q99687 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.53□□□□□ -2
MEIS3Q99687 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
MEIS3Q99687 AC135776.4-201ENST00000624300 1904 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
MEIS3Q99687 AL391987.6-201ENST00000305671 199 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 Y_RNA.286-201ENST00000364813 102 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-1286P-201ENST00000383871 107 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-17P-201ENST00000384245 107 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNY3P4-201ENST00000384428 101 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-843P-201ENST00000384454 104 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-18P-201ENST00000384527 107 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 Y_RNA.518-201ENST00000384552 113 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MEIS3Q99687 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.52□□□□□ -2.01
MEIS3Q99687 MTCYBP2-201ENST00000407745 171 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU4-30P-201ENST00000410245 143 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 AC074117.2-201ENST00000417130 397 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 AL590135.1-201ENST00000422215 156 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MEIS3Q99687 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
MEIS3Q99687 AC007969.2-201ENST00000441891 191 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-717P-201ENST00000459076 104 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RPL30P12-201ENST00000474666 353 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.52□□□□□ -2.01
MEIS3Q99687 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-1012P-201ENST00000516606 109 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 RNU6-1282P-201ENST00000516735 96 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 SNORA31.23-201ENST00000517219 133 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.52□□□□□ -2.01
MEIS3Q99687 HMGN2P15-201ENST00000585707 270 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 MIR6134-201ENST00000617606 109 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 SCARNA4-201ENST00000629045 128 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 U6.104-201ENST00000637979 90 ntBASIC2.52□□□□□ -2.01
MEIS3Q99687 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
MEIS3Q99687 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
MEIS3Q99687 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.51□□□□□ -2.01
MEIS3Q99687 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.51□□□□□ -2.01
MEIS3Q99687 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MEIS3Q99687 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
MEIS3Q99687 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.51□□□□□ -2.01
MEIS3Q99687 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MEIS3Q99687 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.51□□□□□ -2.01
MEIS3Q99687 SNORD113-8-201ENST00000363497 74 ntBASIC2.51□□□□□ -2.01
MEIS3Q99687 Y_RNA.269-201ENST00000364685 89 ntBASIC2.51□□□□□ -2.01
MEIS3Q99687 Y_RNA.274-201ENST00000364714 101 ntBASIC2.51□□□□□ -2.01
MEIS3Q99687 RNU6-1280P-201ENST00000365211 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms