Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 MTND3P21-201ENST00000433774 331 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC1.34□□□□□ -2.19
CDX2Q99626 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.34□□□□□ -2.19
CDX2Q99626 RNU7-63P-201ENST00000459054 62 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC083904.1-201ENST00000487828 231 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC079382.1-201ENST00000493346 557 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC091951.2-201ENST00000500762 203 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC022447.4-201ENST00000504053 364 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC018710.1-201ENST00000506509 158 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC093259.1-201ENST00000509755 300 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.34□□□□□ -2.19
CDX2Q99626 RNU6-358P-201ENST00000516564 75 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 RNA5SP395-201ENST00000516567 118 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.34□□□□□ -2.19
CDX2Q99626 AC109479.2-201ENST00000517842 174 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.34□□□□□ -2.19
CDX2Q99626 AC115990.1-201ENST00000526957 301 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.34□□□□□ -2.19
CDX2Q99626 HSPE1P4-201ENST00000550617 308 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AL157687.1-201ENST00000554853 619 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 ZNF519P2-201ENST00000557032 169 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 MIR548S-201ENST00000581352 82 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 MIR4713-201ENST00000582691 75 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AL034555.1-201ENST00000604816 211 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC092794.2-201ENST00000620933 563 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC022513.1-201ENST00000624512 117 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC100810.6-201ENST00000638068 285 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AC099654.14-201ENST00000638599 341 ntBASIC1.34□□□□□ -2.19
CDX2Q99626 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDX2Q99626 RNU6-428P-201ENST00000362942 107 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 SNORA72.1-201ENST00000363485 129 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 Y_RNA.160-201ENST00000363677 92 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 RNU6-1141P-201ENST00000364520 107 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 SNORA70.7-201ENST00000384159 133 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 RNU6-43P-201ENST00000384302 107 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 Y_RNA.480-201ENST00000384364 102 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 RNU6-434P-201ENST00000384376 107 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 RNU6-831P-201ENST00000384548 107 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 MIR597-201ENST00000384968 97 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 SNORD70.1-201ENST00000391007 85 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AL356776.1-201ENST00000406574 447 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 RNA5SP201-201ENST00000410316 124 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.33□□□□□ -2.2
CDX2Q99626 PDCL2P1-201ENST00000419302 352 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 UBE2V1P4-201ENST00000425374 344 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.33□□□□□ -2.2
CDX2Q99626 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.33□□□□□ -2.2
CDX2Q99626 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.33□□□□□ -2.2
CDX2Q99626 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.33□□□□□ -2.2
CDX2Q99626 SNRPEP8-201ENST00000442866 260 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 PRPS1P1-201ENST00000445305 876 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.33□□□□□ -2.2
CDX2Q99626 HMGN1P12-201ENST00000499125 195 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AC008628.2-201ENST00000502605 298 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.33□□□□□ -2.2
CDX2Q99626 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.33□□□□□ -2.2
CDX2Q99626 AC010493.1-201ENST00000513479 292 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 Y_RNA.665-201ENST00000516177 98 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 SNORA20.3-201ENST00000516880 132 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AP003034.1-201ENST00000534621 422 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 SNORA59B-202ENST00000578183 701 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 RNU6-89P-201ENST00000606519 100 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 AL136221.1-201ENST00000621449 509 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CDX2Q99626 AL450472.1-202ENST00000637286 180 ntBASIC1.33□□□□□ -2.2
CDX2Q99626 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
CDX2Q99626 MIR340-201ENST00000362125 95 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RNU6-1322P-201ENST00000364309 107 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RNU5E-4P-201ENST00000364931 120 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.32□□□□□ -2.2
CDX2Q99626 MIR514A2-201ENST00000385131 88 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 MIR514A3-201ENST00000385132 88 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 MTCYBP2-201ENST00000407745 171 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RNU2-29P-201ENST00000410423 189 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RN7SKP61-201ENST00000410642 295 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RNA5SP501-201ENST00000410990 112 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RNU6-1304P-201ENST00000411374 106 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.32□□□□□ -2.2
CDX2Q99626 SNRPEP10-201ENST00000420249 274 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.32□□□□□ -2.2
CDX2Q99626 AC245102.2-201ENST00000448956 180 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.32□□□□□ -2.2
CDX2Q99626 RNU7-66P-201ENST00000459469 62 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 HMGN2P26-201ENST00000463169 339 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.32□□□□□ -2.2
CDX2Q99626 AL121579.1-201ENST00000555129 305 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 MIR3169-201ENST00000578032 83 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 MIR3942-201ENST00000585264 109 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC060780.3-201ENST00000589464 80 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.32□□□□□ -2.2
CDX2Q99626 AL162413.1-201ENST00000603198 110 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 7SK.7-201ENST00000603504 247 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AL590095.2-201ENST00000604136 117 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC010900.2-201ENST00000604508 210 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC002044.1-201ENST00000606707 158 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AL121757.2-201ENST00000611223 313 ntBASIC1.32□□□□□ -2.2
CDX2Q99626 AC063943.3-201ENST00000615562 356 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms