Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 GPM6BP3-201ENST00000442797 145 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.637-201ENST00000459424 114 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-155P-201ENST00000516347 100 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU1-103P-201ENST00000516502 125 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 AL035425.3-201ENST00000564206 4996 ntBASIC3.19□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-1285P-201ENST00000363480 105 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-727P-201ENST00000363592 107 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-1325P-201ENST00000364905 105 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU4-11P-201ENST00000365287 132 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.357-201ENST00000365487 109 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-140P-201ENST00000384566 108 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR128-1-201ENST00000384921 82 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORD67-201ENST00000390833 111 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNA5SP274-201ENST00000410484 108 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AL390729.2-201ENST00000416137 156 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RAB28P5-201ENST00000427490 651 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AC124916.1-201ENST00000444020 547 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-625P-201ENST00000459412 107 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AL121594.1-201ENST00000475906 575 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNA5SP385-201ENST00000515947 110 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-703P-201ENST00000516946 107 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AC018448.1-201ENST00000552843 316 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 AC010999.1-201ENST00000611856 324 ntBASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.18□□□□□ -1.9
CDK5RAP1Q96SZ6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AC110491.1-201ENST00000562191 2010 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AL359693.1-201ENST00000614959 2407 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.23-201ENST00000362496 106 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORA63.4-201ENST00000362763 126 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.75-201ENST00000362927 97 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-312P-201ENST00000364629 107 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU4-17P-201ENST00000365598 141 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORA54-201ENST00000384281 123 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-851P-201ENST00000384565 107 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.525-201ENST00000384570 113 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR23A-201ENST00000385245 73 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 FTH1P15-201ENST00000406984 280 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.595-201ENST00000410403 105 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNA5SP38-201ENST00000410750 119 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 ELOCP21-201ENST00000412558 336 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AL135790.2-201ENST00000437701 267 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AL137159.1-201ENST00000452808 512 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNA5SP310-201ENST00000459084 116 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-1211P-201ENST00000459179 105 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AC097462.2-201ENST00000504623 481 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU1-143P-201ENST00000516296 146 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 LINC00933-203ENST00000559812 219 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR3921-201ENST00000577308 85 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR5571-201ENST00000577998 113 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 U1.23-201ENST00000610293 146 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU1-68P-201ENST00000615382 146 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 U1.39-201ENST00000621562 146 ntBASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDK5RAP1Q96SZ6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 MTND5P35-201ENST00000557537 1720 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 Y_RNA.127-201ENST00000363386 109 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 SNORD56.3-201ENST00000363507 71 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-799P-201ENST00000363567 107 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 snoU2_19.4-201ENST00000364329 80 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-763P-201ENST00000390865 106 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 RPL26P27-201ENST00000414397 437 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC022018.1-201ENST00000430685 241 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 CR769767.1-201ENST00000436337 346 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 RPL30P12-201ENST00000474666 353 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC083906.5-201ENST00000503722 328 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-919P-201ENST00000516731 104 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 MIR548X2-201ENST00000579776 100 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AL359881.1-201ENST00000602916 267 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AP002826.1-201ENST00000608835 315 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC008873.1-201ENST00000625051 138 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC091564.4-201ENST00000533934 2194 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 AC008264.2-201ENST00000610193 3731 ntBASIC3.16□□□□□ -1.9
CDK5RAP1Q96SZ6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms