Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RBMX2P4-201ENST00000441256 376 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AC112492.4-201ENST00000456549 352 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.66□□□□□ -2.14
RAB40CQ96S21 AC114982.1-201ENST00000469402 321 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40CQ96S21 HMGN2P9-201ENST00000476875 229 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AC103851.1-201ENST00000506833 274 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 PRDX4P1-201ENST00000507189 574 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RAB40CQ96S21 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
RAB40CQ96S21 Y_RNA.670-201ENST00000516255 105 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 Y_RNA.708-201ENST00000516950 96 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 SNORA44.1-201ENST00000517031 108 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 SUMO2P18-201ENST00000518873 252 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AC116312.1-201ENST00000606841 314 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AC103810.8-201ENST00000607347 118 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
RAB40CQ96S21 AC022513.1-201ENST00000624512 117 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 AL159152.1-201ENST00000635019 2587 ntBASIC1.66□□□□□ -2.14
RAB40CQ96S21 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
RAB40CQ96S21 RNU6-137P-201ENST00000363680 108 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 RNU6-1305P-201ENST00000364353 104 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 Y_RNA.405-201ENST00000383979 100 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 Y_RNA.451-201ENST00000384200 100 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 Y_RNA.482-201ENST00000384377 111 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 Y_RNA.524-201ENST00000384564 100 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 Y_RNA.561-201ENST00000384694 100 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 PDCL2P1-201ENST00000419302 352 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 USMG5P1-201ENST00000425964 177 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC074290.1-201ENST00000448883 135 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC097473.1-201ENST00000508142 408 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC067942.3-201ENST00000512025 362 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 SNORA25.14-201ENST00000516481 132 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 RNU2-34P-201ENST00000516534 121 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 RNU6-344P-201ENST00000516635 111 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 RNU6-856P-201ENST00000516959 98 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 RNU1-117P-201ENST00000517041 158 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC134698.4-201ENST00000523451 826 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC104581.2-201ENST00000572227 430 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 MIR3198-2-201ENST00000577868 80 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 AC010900.2-201ENST00000604508 210 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.65□□□□□ -2.15
RAB40CQ96S21 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
RAB40CQ96S21 RNU6-873P-201ENST00000363833 107 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 MIR586-201ENST00000385035 97 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.64□□□□□ -2.15
RAB40CQ96S21 MTND3P10-201ENST00000450967 341 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 ATP5J2P3-201ENST00000451550 258 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC008834.1-201ENST00000511612 175 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.64□□□□□ -2.15
RAB40CQ96S21 Y_RNA.706-201ENST00000516933 99 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.64□□□□□ -2.15
RAB40CQ96S21 SNRPGP18-201ENST00000553000 214 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 UBL5P4-201ENST00000562584 236 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 SNORD11B-201ENST00000607707 90 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC009229.3-201ENST00000608056 282 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC013412.1-201ENST00000610687 192 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC022306.2-201ENST00000617563 647 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 MIR6873-201ENST00000622788 63 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC099654.5-201ENST00000636479 350 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 TPTEP1-208ENST00000636884 213 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 AC099654.14-201ENST00000638599 341 ntBASIC1.64□□□□□ -2.15
RAB40CQ96S21 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
RAB40CQ96S21 SNORD81.2-201ENST00000365153 76 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 RNU6-975P-201ENST00000384296 105 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 RNU6-159P-201ENST00000391080 106 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 SNORA11.4-201ENST00000408823 129 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 NCOR1P3-201ENST00000420479 303 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 AC016717.1-201ENST00000448918 286 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 MTND4P17-201ENST00000470444 350 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 AP000870.1-201ENST00000472927 406 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 RPL7P42-201ENST00000481005 679 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.63□□□□□ -2.15
RAB40CQ96S21 YWHAEP4-201ENST00000505390 198 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 RNU6-948P-201ENST00000516374 107 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40CQ96S21 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40CQ96S21 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.63□□□□□ -2.15
RAB40CQ96S21 AL355802.3-201ENST00000607571 545 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 AC100812.1-201ENST00000607622 580 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 PISRT1.1-201ENST00000616930 107 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 AL078596.1-201ENST00000624856 447 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 AC008873.1-201ENST00000625051 138 ntBASIC1.63□□□□□ -2.15
RAB40CQ96S21 MTND5P6-201ENST00000422338 1798 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 MTND4P12-201ENST00000498999 1377 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 AL356292.1-201ENST00000283110 373 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNU1-62P-201ENST00000362599 164 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNU5F-3P-201ENST00000363767 117 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNU6-280P-201ENST00000364145 104 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 RNU6-1283P-201ENST00000365314 105 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 XGY1-201ENST00000381172 446 ntBASIC1.62□□□□□ -2.15
RAB40CQ96S21 SNORA67.2-201ENST00000384300 149 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms