Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 SNORD105-201ENST00000386910 85 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AL663109.1-201ENST00000411498 844 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC093534.1-201ENST00000504977 132 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AP003181.2-201ENST00000528941 181 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC004584.2-201ENST00000570407 410 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 MIR5006-201ENST00000583027 110 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AL078603.1-201ENST00000603824 313 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AP001836.1-201ENST00000604675 523 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC005562.2-201ENST00000618264 111 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC008133.2-201ENST00000624540 351 ntBASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.04□□□□□ -2.42
AP1S3Q96PC3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 MIR103A2-201ENST00000362154 78 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNA5SP62-201ENST00000363457 110 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNU6-116P-201ENST00000384042 109 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNU6-815P-201ENST00000384080 113 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 SNORA67.2-201ENST00000384300 149 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 MIR526A1-201ENST00000384897 85 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 CALM2P3-201ENST00000400429 449 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 MTCO3P8-201ENST00000453691 755 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 MTCO3P10-201ENST00000455912 772 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNU6-863P-201ENST00000515989 104 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNU6-567P-201ENST00000516746 107 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 MTATP6P15-201ENST00000527233 835 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AL121992.2-201ENST00000606262 256 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AC007014.2-201ENST00000615581 479 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 AC078938.1-201ENST00000620993 318 ntBASIC-0.05□□□□□ -2.42
AP1S3Q96PC3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 RNU6-827P-201ENST00000365553 106 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 RNU6-42P-201ENST00000384165 107 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 RNU6-809P-201ENST00000384461 107 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 MTATP6P16-201ENST00000434543 526 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AP000870.1-201ENST00000472927 406 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AC010587.1-201ENST00000505809 469 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AC117522.1-201ENST00000509821 380 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AC116347.2-201ENST00000514912 523 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 RNU6-1220P-201ENST00000517126 108 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AF235103.2-201ENST00000525753 346 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 AL390237.1-201ENST00000404226 1415 ntBASIC-0.06□□□□□ -2.42
AP1S3Q96PC3 Y_RNA.224-201ENST00000364308 111 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 RNU6-641P-201ENST00000384006 107 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 Y_RNA.476-201ENST00000384347 108 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AC106883.1-201ENST00000418805 562 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 MTCO2P6-201ENST00000463134 685 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 SNORD111.1-201ENST00000516421 86 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 RNU6-323P-201ENST00000521915 107 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AP003327.1-201ENST00000529684 127 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 NTS-203ENST00000551529 801 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 MIR4667-201ENST00000578933 66 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 MTND1P15-201ENST00000579262 949 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AL162424.1-201ENST00000602325 221 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 AC007684.1-201ENST00000609671 477 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 TCL6_2.1-201ENST00000615162 119 ntBASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.07□□□□□ -2.42
AP1S3Q96PC3 SNORD114-9-201ENST00000364370 72 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 RNU4-67P-201ENST00000364569 141 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 RNU6-715P-201ENST00000365204 103 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 SNORD115-7-201ENST00000365306 82 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 MIR1827-201ENST00000408549 66 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 RNU2-70P-201ENST00000410718 179 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 RNU2-8P-201ENST00000410727 190 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 MTCO2P34-201ENST00000421994 607 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 MED13P1-201ENST00000428342 171 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 MTCO2P7-201ENST00000446518 666 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 FRG2DP-202ENST00000566967 323 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 EIF1P4-201ENST00000572664 335 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 BNIP3P40-201ENST00000596017 556 ntBASIC-0.08□□□□□ -2.42
AP1S3Q96PC3 AL592221.1-201ENST00000605266 382 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms