Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNU6-448P-201ENST00000517052 107 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-840P-201ENST00000517275 65 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AC246785.4-201ENST00000605374 287 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AL118556.2-201ENST00000614375 824 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AL162376.1-201ENST00000624117 175 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 SNORD32A-201ENST00000364805 84 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 SNORD41-201ENST00000386967 70 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 SNORA12.2-201ENST00000391040 156 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNY4P36-201ENST00000391116 96 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 PSMA6P3-201ENST00000428242 164 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MTND1P33-201ENST00000446251 917 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MTCO3P28-201ENST00000513351 515 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-848P-201ENST00000515948 107 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-617P-201ENST00000516147 107 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-473P-201ENST00000516164 107 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC-0.53□□□□□ -2.49
SPG11Q96JI7 ELOCP32-201ENST00000548625 324 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MIR3612-201ENST00000579753 87 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 AL513423.1-201ENST00000621695 132 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MIR6079-201ENST00000635807 62 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 MIR499B-201ENST00000636498 73 ntBASIC-0.53□□□□□ -2.49
SPG11Q96JI7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-0.54□□□□□ -2.5
SPG11Q96JI7 SNORA3B-201ENST00000391305 131 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC016831.2-201ENST00000417179 352 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RPL21P38-201ENST00000418090 167 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC027644.1-201ENST00000419595 298 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AL354692.1-201ENST00000423044 315 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC-0.54□□□□□ -2.5
SPG11Q96JI7 LARP1BP3-201ENST00000437229 869 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AL606517.2-201ENST00000442855 241 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC006026.2-201ENST00000457376 180 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC109445.1-201ENST00000512356 383 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNU7-129P-201ENST00000516128 62 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 SNORA31.10-201ENST00000516482 106 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC109446.1-201ENST00000566172 220 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC078795.3-201ENST00000602913 472 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC022217.4-201ENST00000604389 163 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC131159.1-201ENST00000621854 213 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 MIR1-1-201ENST00000362147 71 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNU6-1167P-201ENST00000363227 94 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNU6-811P-201ENST00000384069 107 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNU6-24P-201ENST00000384440 107 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNU6-331P-201ENST00000384724 107 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNY1P7-201ENST00000384743 110 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
SPG11Q96JI7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
SPG11Q96JI7 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC093019.1-201ENST00000443135 252 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 SNORA31.19-201ENST00000517079 126 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC006600.1-201ENST00000572529 153 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AC137800.2-201ENST00000574375 120 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 BCRP9-201ENST00000605312 388 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 AL357080.1-201ENST00000617394 239 ntBASIC-0.54□□□□□ -2.5
SPG11Q96JI7 SNORD31B-201ENST00000364977 69 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 RNA5SP482-201ENST00000391269 118 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 RNA5SP467-201ENST00000391274 118 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC009237.7-201ENST00000447357 229 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.55□□□□□ -2.5
SPG11Q96JI7 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 RNU1-117P-201ENST00000517041 158 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 MTCO3P15-201ENST00000526563 574 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC091912.2-201ENST00000624798 167 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 SNORD116-20-201ENST00000384529 92 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC068533.2-201ENST00000411872 306 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC007327.1-201ENST00000447461 264 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 HIGD1AP6-201ENST00000521833 279 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AL117336.2-201ENST00000602435 335 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC078795.2-201ENST00000602835 1252 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC135803.1-201ENST00000608748 565 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AL355816.2-201ENST00000610049 647 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 AC022960.3-201ENST00000619794 441 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 MIR6828-201ENST00000636181 60 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 U6.107-201ENST00000637108 79 ntBASIC-0.55□□□□□ -2.5
SPG11Q96JI7 RNU6-199P-201ENST00000362954 107 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 RNU6-188P-201ENST00000364207 107 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 RNU6-187P-201ENST00000384139 106 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 MIR501-201ENST00000390204 84 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 MIR873-201ENST00000401120 77 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 RNA5SP163-201ENST00000410304 99 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 RNU2-28P-201ENST00000410457 189 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 MTCYBP5-201ENST00000423752 1135 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 PCNPP5-201ENST00000452246 481 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 snoU13.14-201ENST00000459372 104 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.56□□□□□ -2.5
SPG11Q96JI7 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 SUMO2P18-201ENST00000518873 252 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AC021231.3-201ENST00000558497 370 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 AL158211.4-201ENST00000606988 584 ntBASIC-0.56□□□□□ -2.5
SPG11Q96JI7 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms