Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PDLIM5Q96HC4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
PDLIM5Q96HC4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PDLIM5Q96HC4 MTND5P10-201ENST00000603719 1809 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.5-201ENST00000362334 102 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RNU4-15P-201ENST00000362613 141 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.138-201ENST00000363462 102 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.197-201ENST00000364004 102 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RNU6-1286P-201ENST00000383871 107 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.395-201ENST00000383945 109 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RNU6-474P-201ENST00000384243 107 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 SNORA8-201ENST00000384574 139 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RNU6-160P-201ENST00000384591 107 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 SNORA64-201ENST00000384674 134 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 SNORA3.2-201ENST00000408221 125 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AL139156.1-201ENST00000412785 841 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 EIF1AXP1-201ENST00000419267 435 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 DPH3P2-201ENST00000422618 250 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC096638.1-201ENST00000444678 216 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RPL23AP42-201ENST00000471152 471 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AF186996.7-201ENST00000492781 209 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 ANXA2P1-201ENST00000505539 926 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 SNORA31.16-201ENST00000516773 139 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 HSPE1P18-201ENST00000517602 280 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC016256.1-201ENST00000547971 354 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 MIR5089-201ENST00000580047 84 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC010928.2-201ENST00000588017 287 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC002984.1-201ENST00000591692 448 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC080078.3-201ENST00000605407 463 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 AC064859.1-201ENST00000624741 174 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 ZNF299P-201ENST00000406845 1804 ntBASIC1.98□□□□□ -2.09
PDLIM5Q96HC4 RNY1P16-201ENST00000363063 111 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 RNU6-1040P-201ENST00000383974 107 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 Y_RNA.463-201ENST00000384271 102 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 MIR1283-2-201ENST00000408621 87 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 RN7SKP223-201ENST00000410582 62 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 Z82188.1-201ENST00000436709 154 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 MTCYBP6-201ENST00000441810 138 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 AC007677.1-201ENST00000445757 515 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 RPL17P19-201ENST00000489069 552 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 AC022493.2-201ENST00000506122 481 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 RNU6-1170P-201ENST00000515974 106 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 RNA5SP490-201ENST00000517141 136 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 SUB1P3-201ENST00000564581 315 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 uc_338.22-201ENST00000622722 187 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PDLIM5Q96HC4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 MIR369-201ENST00000362155 70 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 RNU6-1115P-201ENST00000362490 106 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 RNU6-1164P-201ENST00000364428 107 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 SNORD32B-201ENST00000364460 84 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 RNU2-2P-201ENST00000410396 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 RNA5SP494-201ENST00000410653 129 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AL354751.2-201ENST00000415471 210 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AL358453.1-201ENST00000422522 250 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 RNU6-699P-201ENST00000517081 110 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.15-201ENST00000611544 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.16-201ENST00000613119 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.12-201ENST00000613778 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.20-201ENST00000613956 192 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AC133104.2-201ENST00000615272 193 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.9-201ENST00000615427 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.11-201ENST00000616345 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.2-201ENST00000616535 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.3-201ENST00000617785 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.19-201ENST00000618602 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 RNU2-1-201ENST00000618664 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.6-201ENST00000619225 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.5-201ENST00000619465 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 U2.10-201ENST00000620268 191 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AC091925.1-201ENST00000623204 462 ntBASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PDLIM5Q96HC4 CENPCP1-201ENST00000533085 2578 ntBASIC1.95□□□□□ -2.1
PDLIM5Q96HC4 RNU6-490P-201ENST00000362985 107 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms