Protein–RNA interactions for Protein: Q96CM3

RPUSD4, Mitochondrial RNA pseudouridine synthase RPUSD4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4Q96CM3 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC069439.1-201ENST00000494739 167 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 YWHAEP4-201ENST00000505390 198 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC116337.1-201ENST00000509680 687 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC046134.1-201ENST00000514454 666 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AP005660.1-201ENST00000522972 293 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC104581.2-201ENST00000572227 430 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 MIR4742-201ENST00000581069 85 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AC103810.8-201ENST00000607347 118 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 U6atac.1-201ENST00000616025 117 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 AP000648.3-201ENST00000623539 4507 ntBASIC1.37□□□□□ -2.19
RPUSD4Q96CM3 RNU1-62P-201ENST00000362599 164 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RNU6-545P-201ENST00000362681 104 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.132-201ENST00000363421 102 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RNU6-595P-201ENST00000363944 107 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RNU6-975P-201ENST00000384296 105 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 FGF7P8-201ENST00000402994 292 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 MIR548K-201ENST00000408406 116 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RN7SKP51-201ENST00000410781 304 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RPL30P16-201ENST00000419341 429 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 MTATP6P13-201ENST00000438531 667 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 NDUFB4P10-201ENST00000452541 359 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RN7SKP210-201ENST00000459176 261 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC114982.1-201ENST00000469402 321 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 HMGN2P9-201ENST00000476875 229 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RPL30P10-201ENST00000488148 337 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RNU6-58P-201ENST00000517143 103 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 RRN3P3-201ENST00000549207 578 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC027288.2-201ENST00000553028 243 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 MIR5006-201ENST00000583027 110 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC116312.1-201ENST00000606841 314 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 AC093913.1-201ENST00000614178 329 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 ZNF299P-201ENST00000406845 1804 ntBASIC1.36□□□□□ -2.19
RPUSD4Q96CM3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 MIR126-201ENST00000362291 85 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.166-201ENST00000363730 102 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 RNU5F-3P-201ENST00000363767 117 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.339-201ENST00000365325 102 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AL117342.1-201ENST00000404861 406 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.619-201ENST00000410951 90 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 Z82188.1-201ENST00000436709 154 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 UBE2DNL-203ENST00000474922 222 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AC082651.2-201ENST00000496833 166 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 RNU6-948P-201ENST00000516374 107 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 RNU1-54P-201ENST00000517181 120 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 MTND4LP26-201ENST00000518144 282 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 SUMO2P18-201ENST00000518873 252 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 MIR4648-201ENST00000580107 72 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 MIR4753-201ENST00000585119 83 ntBASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.35□□□□□ -2.19
RPUSD4Q96CM3 RNU6-661P-201ENST00000362409 107 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 U8.2-201ENST00000363156 134 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 RNU6-112P-201ENST00000363599 104 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.279-201ENST00000364763 95 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 Y_RNA.319-201ENST00000365138 92 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 RNU6-159P-201ENST00000391080 106 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AL079342.1-201ENST00000401460 267 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AC097473.1-201ENST00000508142 408 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AC026782.1-201ENST00000512952 449 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 MIR5701-3-201ENST00000578890 82 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 MIR5701-1-201ENST00000585138 82 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AL158827.2-201ENST00000602494 330 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AC018462.2-201ENST00000605375 395 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 MIR5701-2-201ENST00000615634 82 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AL691447.3-201ENST00000635020 330 ntBASIC1.34□□□□□ -2.19
RPUSD4Q96CM3 AL159152.1-201ENST00000635019 2587 ntBASIC1.34□□□□□ -2.2
RPUSD4Q96CM3 ZNF204P-201ENST00000416749 2397 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 RNU6-842P-201ENST00000384269 107 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 RNU6-296P-201ENST00000384608 107 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 RNU6-306P-201ENST00000384617 107 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 MIR32-201ENST00000384965 70 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 MIR934-201ENST00000401241 83 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 RNU6-955P-201ENST00000410497 104 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 RNA5SP504-201ENST00000410676 117 ntBASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.33□□□□□ -2.2
RPUSD4Q96CM3 Z82205.1-201ENST00000428456 297 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms